KEGG   Thermobifida fusca: Tfu_1901
Entry
Tfu_1901          CDS       T00265                                 
Name
(GenBank) HRDC:3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
tfu  Thermobifida fusca
Brite
KEGG Orthology (KO) [BR:tfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tfu03016]
    Tfu_1901
Enzymes [BR:tfu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Tfu_1901
Transfer RNA biogenesis [BR:tfu03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Tfu_1901
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC Esterase
Other DBs
NCBI-ProteinID: AAZ55934
UniProt: Q47NN5
LinkDB
Position
2225998..2227260
AA seq 420 aa
MLNSKTEESPDPESTASEQTPEAPLLSEPRDGIPPVVADDEELARVAAKFAAGSGPVAVD
AERASGYRYGQRAYLVQLRRAGAGTALIDPVACPDLSVLRDAVGDAEMVLHAAHQDLPCL
TEVHLRPRRLFDTELAGRLLGYQRVGLGAMVERVLGVRLAKEHAAVDWSTRPLPEDWLRY
AALDVEVLIELRDALEAELAETGKLEWARQEFAAVLAAPPKEPRPDPWRRTSGIHRVRSQ
RGLGVVRELWLERDRIARERDLSPGRVLQDSAIVEAALAMPRTPQELTAIKTFTVRLARR
YVPVWLKAINRVRDMKPAELPQPSPPGYGPPPTNRWADRDPAAARRLEAARSVVAEIAER
VGMPTENLLQPDAVRRLAWSPPSQVSVDSVAEHLRTHQARDWQIELTAAALAEALRAADR
NT seq 1263 nt   +upstreamnt  +downstreamnt
gtgctgaactccaagaccgaagaaagccccgatcctgagtccactgcctcagaacagacg
cctgaagctcccctgctgagcgagcccagagacgggattcccccggtcgtcgccgacgat
gaggaactggcacgcgtggccgccaagttcgccgcgggcagcgggccggtcgcggtggac
gccgaacgcgcctcgggataccgctacggacagcgcgcctacctggtccaactacgccgg
gccggggccggcacggcgctgatcgacccggtggcctgtcctgatctgtcggtgttgcgg
gacgcggtcggcgacgccgagatggtgctgcacgcggcccaccaggacctgccctgtctc
accgaagtgcacctgcgcccgcggcgcttgttcgacaccgagttggccgggcggctgctc
ggctaccagcgggtcggcttgggtgccatggtggagcgggtcctgggcgtccggctcgct
aaagagcatgctgcggtggactggtcgacccggccgctgccggaggactggctgcgctat
gccgcgctggatgtcgaggtcctcatcgagctgcgggacgcgttggaagctgaactggct
gagacgggcaagctggagtgggcacgccaggagttcgcggcggtactggccgctccgccg
aaagagccgcgtcctgatccgtggcggcgcacttcggggatccaccgggtccgcagccag
cgcggcttgggtgtggttcgggaactgtggctggaacgcgaccggattgcccgggagcgc
gacctgtctccgggccgggtgctgcaagactcggcgatcgtggaggccgccctggccatg
cccaggaccccgcaggagttgaccgcgatcaaaacgttcacggtccgcctggcccgccgc
tatgtcccggtgtggctcaaagccatcaaccgggtgcgggacatgaaaccggcggagctg
ccccagccgagtccgccaggctacgggcccccgcccacgaaccggtgggccgaccgggat
ccagccgcggcgcggcggctcgaggcggcgcgttccgtggtcgcggagatcgcggagcgg
gtgggcatgccgacggagaacctgctgcagccggatgcggtccgccgtctcgcctggtcg
ccgccgagccaggtcagtgtcgactcggtggccgagcacctgcgcacgcaccaggcccgt
gactggcagatcgagttgactgcggctgcgctggccgaggcgctgcgtgccgcggaccgt
tga

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