Thermobifida fusca: Tfu_2353
Help
Entry
Tfu_2353 CDS
T00265
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tfu
Thermobifida fusca
Pathway
tfu00260
Glycine, serine and threonine metabolism
tfu00460
Cyanoamino acid metabolism
tfu00630
Glyoxylate and dicarboxylate metabolism
tfu00670
One carbon pool by folate
tfu00680
Methane metabolism
tfu01100
Metabolic pathways
tfu01110
Biosynthesis of secondary metabolites
tfu01120
Microbial metabolism in diverse environments
tfu01200
Carbon metabolism
tfu01230
Biosynthesis of amino acids
tfu01240
Biosynthesis of cofactors
tfu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Tfu_2353
09102 Energy metabolism
00680 Methane metabolism
Tfu_2353
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Tfu_2353
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Tfu_2353
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Tfu_2353
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Tfu_2353
Enzymes [BR:
tfu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Tfu_2353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
SelA
Motif
Other DBs
NCBI-ProteinID:
AAZ56386
UniProt:
Q47MD6
LinkDB
All DBs
Position
2769151..2770422
Genome browser
AA seq
423 aa
AA seq
DB search
MTAQSTSLTQSLAQLDPEVAAAVDAELARQRDTLEMIASENFAPRAVLEAQGTVLTNKYA
EGYPGRRYYGGCEHVDVIEQLAIDRAKALFGAEHANVQPHSGAQANTAVYFALLQPGDTI
LGLDLAHGGHLTHGMRINYSGKILNAVAYHVRESDGLIDYDEVEALAKEHQPKLIIAGWS
AYPRQLDFARFREIADQTGALLMVDMAHFAGLVAAGLHPNPVPYADVVTTTTHKTLGGPR
GGLILAKEELGKKINSAVFPGMQGGPLQHVIAAKAVALKVAASEEFAERQRRTLSGAKIL
AERLTQPDAAEAGIRVLTGGTDVHLVLVDLVNSELNGKEAEDRLHEIGITVNRNAVPNDP
RPPMVTSGLRIGTPALATRGFGDADFAEVADIIAEALKPGFDAATLRSRVQALAAKHPLY
PGL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccagagcacttcgctcacccagtcgctggctcagctcgaccctgaggtcgcg
gcagccgtggacgccgagctcgcccgccagcgcgacaccttggagatgatcgcctccgaa
aactttgcgccccgggcggtgctggaggcgcaaggcacggtgctgaccaacaagtacgcg
gaaggctacccgggccgccgctactacggcgggtgtgagcacgtggacgtcatcgaacag
ctggccatcgaccgtgccaaggccctgttcggtgccgagcacgccaacgtgcagccgcac
tcgggcgctcaggcgaacaccgccgtgtactttgcgctgctgcagccgggcgacaccatc
ctgggcctggacctcgcacacggcgggcacctcacccacggcatgcggatcaactactcc
ggcaagatcctcaacgccgtggcctaccacgtacgcgagtccgacggcctgatcgactac
gacgaggtcgaagcgctagccaaggagcaccagccgaaactgatcatcgcgggctggtcg
gcgtacccgcgccagttggactttgcccggttccgggagatcgccgaccagacaggcgcc
ctcctcatggtggatatggcgcatttcgcgggtctggtcgcggctggactgcaccccaac
ccggtcccctacgccgacgtagtgaccaccaccacccacaagaccttgggcgggccgcga
ggcgggctcatcctggccaaggaggagctgggcaagaagatcaactcggcggtgttcccg
gggatgcagggcggtccgctccagcacgtcatcgctgccaaggccgtagcgttgaaggtc
gcggccagcgaagagttcgctgagcggcagcggcgcaccctttccggcgcgaagatcctc
gccgagcggctcacccagcctgacgcggccgaggccggtattcgggtgctgaccggcggc
accgacgtccacctggtcctggtcgacctggtcaactcggaactcaacggcaaagaggcg
gaggaccggctgcacgagatcggtatcacggtcaaccgcaacgcggtccccaacgacccg
cggccgcccatggtcacgtcgggactgcggatcggcaccccggctctcgccacccgcggt
ttcggcgacgccgacttcgctgaggtcgccgacatcatcgctgaggcgctcaagccgggc
ttcgacgcggcgaccctgcgctcccgcgtccaggcgctggccgccaagcacccgctctac
cctggactgtga
DBGET
integrated database retrieval system