Thermobifida fusca: Tfu_2580
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Entry
Tfu_2580 CDS
T00265
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tfu
Thermobifida fusca
Pathway
tfu03420
Nucleotide excision repair
tfu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tfu_2580
03430 Mismatch repair
Tfu_2580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfu03400
]
Tfu_2580
Enzymes [BR:
tfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tfu_2580
DNA repair and recombination proteins [BR:
tfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tfu_2580
MMR (mismatch excision repair)
Other MMR factors
Tfu_2580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AAZ56613
UniProt:
Q47LQ9
LinkDB
All DBs
Position
complement(3045031..3047295)
Genome browser
AA seq
754 aa
AA seq
DB search
MSSQEQLLEGLNELQRAAVLHHGSPLLIIAGAGSGKTRVLTHRIAYLLAERGVRPSEVLA
ITFTNKAAAEMKERVERLLGERTASAMWVMTFHSACVRILRREAARLGYPSSFTIYDSAD
SQRLMQLVCRELDLDPKRFPPKSFSAQVSSLKNELVDYDTFAGRAETVQERALAEAYQLY
QQRLYEAGAMDFDDLIMVTVHLLQMFPEVAEHYRRRFRHLLVDEYQDTNHAQYALIRELV
GDGDPATPGPELCVVGDADQSIYAFRGATIRNILEFERDYPQATTILLEQNYRSTQTILS
AANAVIAHNTERRPKNLWSAQGEGEPIVGYVADDERDEATFVVQEIDALTDAGTCTPGDV
AVFYRTNAQSRVLEEVFVRTGMPYRIVGGVRFYERKEIRDILAYLRVLANPEDSVSLRRI
LNVPKRGIGERAEQVIEQFAAQERITFAQALRRADEAPGIATRSLKAIKEFVALLEELEE
LAATRSPAETIEAVLERTGYLEELVNSKDIQDESRVENLEEFVGVAREFESSFDAALAAE
GADGETGRDGAEPTLVDFLEQVSLIADTDQLPDEDDQGGAVTLMTLHSAKGLEFPVVFLT
GLEDGVFPHLRALGDRSALEEERRLVYVGITRAQERLYLTRAATRSSWGAAAYNPPSRFL
DEIPAELVTWRRAESTTEALRRSVSPARTSRPTRKAERPVLALRPGDKVNHDSFGLGTVL
SVDGTGDRTRARVDFGAGVGQKDLMVKFAPLEKL
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcccaagagcagcttctcgaaggtctcaacgagctccagcgcgccgcggtgctc
caccacggcagcccgctgctgatcatcgctggagcggggtcaggcaagacccgtgtcctc
acccaccgcatcgcctacctgctggccgagcggggagtccgccccagcgaggtgctcgcg
atcaccttcaccaacaaagccgcagccgagatgaaggagcgtgtcgagcggctgctcggt
gaacgcacggccagcgccatgtgggtgatgaccttccactcggcctgtgtgcgcatcctg
cgccgcgaggcggcccgcctgggataccccagcagtttcaccatctacgactccgcggac
tcccagcggctgatgcaactggtctgccgcgaactcgacctggaccccaaacgcttcccg
cccaagtcgttctccgcccaggtgtcgagcctgaagaacgaactggtggactacgacacg
ttcgcggggcgggcagaaaccgtgcaggagcgcgctctcgcggaggcgtaccagctctac
cagcagcgcctctacgaggcgggggcgatggacttcgacgacctcatcatggtcacggtc
catctgctgcagatgttccccgaggtcgccgagcactaccggcggcggttccggcacctg
ctggtcgacgagtaccaggacaccaaccacgcccaatacgccctgatccgggagctcgta
ggcgacggcgaccccgccaccccgggaccggaattgtgcgtggtgggcgacgccgaccag
tccatctacgccttccgcggggcgacgatccgcaacattctggagttcgagcgcgactac
ccgcaggccaccaccatcctgctggagcagaactaccggtccacgcagaccatcctctcc
gcagccaacgccgttatcgcgcacaacacggagcgccgcccgaaaaacctgtggtccgcc
cagggagagggcgagcctatcgtcggctatgtcgccgacgatgagcgcgacgaggcaacg
ttcgtcgtccaggagatcgacgccctcaccgacgcgggaacctgcacccccggcgatgtc
gcggtgttctaccggaccaacgcccagtcccgcgtactggaggaagtgttcgtccgcacc
ggcatgccgtaccggatcgtcggcggggtgcggttctacgaacgcaaggagatccgcgac
atcctcgcctacctccgcgtgctggccaaccctgaggactcggtgagcctgcgccgcatt
ctgaacgtgccgaaacgcgggatcggggagcgggccgagcaggtcatcgaacagttcgcg
gcacaggagcggatcacgttcgcgcaggccctgcgccgcgcagacgaagcaccgggaatc
gccacccgctcgctcaaagcgatcaaagagttcgtcgcgctcctcgaagaactcgaggag
ctggctgccacccgcagcccggccgagacgattgaagcggtcctggaacgcaccggctac
ttggaagagctcgtcaactccaaggacatccaggacgagagccgcgtggagaacctcgag
gagttcgtcggcgtcgcccgcgagttcgaatcgtcttttgacgccgcgctggccgcagaa
ggagccgacggggaaaccggccgcgacggtgcggaaccgaccctggtggacttcctcgag
caggtctccctcatcgccgacaccgaccagctccctgacgaggacgaccagggcggggcc
gtcaccctcatgaccctccactcggccaaaggattggagtttcccgtggtcttcctcacc
gggttggaggacggggtcttcccgcacctgcgggcgctcggcgaccggtccgcactggaa
gaggagcggcggctggtctacgtcggtatcacccgtgcccaggagcggctctacctgacc
cgggctgcgacacgcagctcctggggggccgcggcctacaaccctccgtcgcggtttttg
gacgagattcccgcagaactcgtgacctggcgccgggcagagtccacgacggaggcgctc
cgccgttccgtgtcccctgcccgcacgtcgcggccgacccgcaaggccgagcgcccggtg
ctagcgctgcggccaggcgacaaggtgaaccacgactcctttgggctgggcaccgtgctc
tcggtcgacggcaccggggatcggacgcgggcccgtgtcgacttcggagcgggggtcggg
cagaaggacctcatggtcaagttcgctccgttggagaagctctga
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integrated database retrieval system
