Thermobifida fusca: Tfu_2616
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Entry
Tfu_2616 CDS
T00265
Name
(GenBank) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tfu
Thermobifida fusca
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfu03016
]
Tfu_2616
Enzymes [BR:
tfu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Tfu_2616
Transfer RNA biogenesis [BR:
tfu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tfu_2616
Prokaryotic type
Tfu_2616
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AAZ56649
UniProt:
Q47LM3
LinkDB
All DBs
Position
complement(3091194..3092084)
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AA seq
296 aa
AA seq
DB search
MPGSRQGAGHLSWTETGTVTDETLTRLRLDISYDGTDFSGWAEQPGRRTVQGELQAALAR
VLRIPTPQLTVAGRTDAGVHARGQVAHVDVPASVWEAEGERLLRRLAGVLPPDVRVTAVA
PAPPGFDARFSALFRRYVYRVSDAPGGVDPLRRHEVLWHRRPLDVDRMNEAAAALLGEHD
FAAYCRKREGASTVRELQRLEWRRESEHVYAATVQADAFCHNMVRALVGALLAVGDGRRP
PEWPAQVLRAGVRDSAVHVVPPHGLTLEEVRYPADEELAARAAATRRFRVLERAAE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcccggttcccgtcagggggccgggcatttgtcgtggacggagacaggaacagtgacg
gacgagactctgacccggctgaggttagacatttcctatgacggcacggacttctccggg
tgggcggagcagccgggaaggcgcaccgtccaaggggagctccaggcagcactggcccgg
gtgctgcggatccccaccccccagttgaccgtggcgggccgcacggatgcgggagtgcac
gcccgcggccaggtggcccacgtggacgtgcccgcgtccgtgtgggaggccgagggggag
cggctgctgcgccgcctggccggggtgctgcctcctgacgtccgggtgaccgcggtagcc
ccggcacccccggggttcgacgcccggttttccgcgctgttccgccgctacgtttaccgg
gtgagcgatgccccgggcggggtggatccgctgcgccgccacgaagtcttgtggcaccgc
cgccccttggacgtcgaccggatgaacgaggctgcggccgccctgctgggcgaacacgac
ttcgccgcctactgccggaaacgggagggagcgtccacggtccgggagctccagcgtttg
gagtggcggcgggagagcgagcacgtgtacgcggccacggtgcaagcggacgcgttctgc
cacaacatggtgcgcgccctagtgggggcgctgctcgcggtgggggacggccgtcgtccc
ccggagtggcctgctcaagtgctccgggccggggtacgcgattcggcggtgcacgtggtg
ccgccgcacggcctcacgttggaggaggtgcgctacccggcggatgaggagctggccgca
cgggccgcggcgacccgcaggttccgggtcttggagcgggccgcagagtag
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