Thermobifida fusca: Tfu_2618
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Entry
Tfu_2618 CDS
T00265
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tfu
Thermobifida fusca
Pathway
tfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tfu_2618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfu03021
]
Tfu_2618
03400 DNA repair and recombination proteins [BR:
tfu03400
]
Tfu_2618
Enzymes [BR:
tfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tfu_2618
Transcription machinery [BR:
tfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tfu_2618
DNA repair and recombination proteins [BR:
tfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tfu_2618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
AAZ56651
UniProt:
Q47LM1
LinkDB
All DBs
Position
complement(3092701..3093717)
Genome browser
AA seq
338 aa
AA seq
DB search
MLIAQRPTLTEEPISEFRSKFILEPLEPGFGYTIGNSLRRTLLSSIPGAAVTSIRIEGVE
HEFTTVPGVKEDVTEIILNLKGLVVSSEHDEPVLMYLRKQGPGVVTAADIAPPAGVEVHN
PEMHIATLNSKGKLEMEMTVERGRGYVSAAQNKQPGQEIGRIPIDSIYSPVMRVTYKVEA
TRVEQRTDFDRLILDVWTKPAIRPRDAVASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEDLNLTVRSYNCLKREGIHTVGELVARTEQDLLDIRNFGAKSIEEVKQK
LSDMGLALKDAQGGFDPGSAAGSYGSDHDQSYVETEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtcccaccctgaccgaagagccgatctccgagttccgctccaag
ttcatccttgaacccctggagccgggcttcggctacaccatcgggaactcgctgcgccgc
accctgctgtcgtcgattcccggtgctgccgtgaccagcatccgcatcgagggtgttgag
cacgagttcaccaccgtgcccggcgtcaaggaggacgttaccgagatcatcctgaacctc
aagggtctcgtggtgagctcggagcacgacgagccggtactgatgtacctgcgcaagcag
ggaccgggagtggtcaccgccgccgatatcgctccgcctgccggggtcgaggtgcacaac
ccggagatgcacatcgcgaccctgaacagcaagggcaagctggagatggagatgacggtc
gaacggggccgtggctacgtctccgccgcccagaacaagcagccggggcaggagatcggc
cggattccgattgactccatctactctcccgtcatgcgggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgaccgcctcatcctggacgtctggaccaagccg
gccatccggcctcgcgacgcggtggccagcgcgggcaagaccctggtggagctgttcggg
ttggcgcgggagctcaacgtcgacgccgaaggcatcgacatgggtccctctcccacggac
gctgcgctggccgcggatctggcactgccgatcgaggacctcaacctcacggtccgctcc
tacaactgcctcaagcgcgagggtatccacacggtcggcgagctcgtcgctcgcaccgag
caggacctgctggacatccggaacttcggtgcgaagtcaatagaggaagtcaagcagaag
ctgagcgacatggggctcgcgctgaaggacgcccagggcgggttcgacccggggagcgcg
gccggttcgtacggttccgaccacgaccagtcctacgtcgagactgagcagtactag
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