Thermobifida fusca: Tfu_2653
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Entry
Tfu_2653 CDS
T00265
Name
(GenBank) RNA polymerase I subunit A, N-terminal
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tfu
Thermobifida fusca
Pathway
tfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tfu_2653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfu03021
]
Tfu_2653
03400 DNA repair and recombination proteins [BR:
tfu03400
]
Tfu_2653
Enzymes [BR:
tfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tfu_2653
Transcription machinery [BR:
tfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tfu_2653
DNA repair and recombination proteins [BR:
tfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tfu_2653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPN1_C
Apocytochr_F_C
TarH
Motif
Other DBs
NCBI-ProteinID:
AAZ56686
UniProt:
Q47LI6
LinkDB
All DBs
Position
complement(3116804..3120679)
Genome browser
AA seq
1291 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMVTWVDTEARERDLPSLEAQISVERQHLEQRRDSAIEERHRKLEAD
LAELEEQGAKADARRKVREAAEREIRQIRDRAQREIDRLEEVWNRFKNLKVQDLEGDEQL
YREMRDRFGKYFRGGMGAQAIKERLANFDLEAEAEKLREIIRTGKGQKKARALKRLKVVS
AFLNTRNSPMGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLATNNILKPSDGKPVTMPTQDMVIGLYYLTTMKEGAKGEGR
AFSNIGEAIMAYDLGELDLQAKIKLRVEGDTVPPVNWEPPEDYQPGQPYILETTLGRYLF
NETTPEDYPFVNQQMGKKQLSALVTELAEKYSKVQVATTLDALKDAGYYWATRSGLTISI
SDVIPPPNKQQILDKYEQQAQKIQRQYERGLISDDERRQELIHIWTKATDEVAKDMEENS
PPDNPVWMMVNSGSRGNPLQVRQIAAIRGLVSNTKGETIPRPIKSSYREGLTVLEYFIST
HGQRKGLADTALRTADSGYLTRRLVDVAQDVIVREVDCGTDRFLWQEIGERRPDGTIVRK
HNVENTGFGRTLAEDVVVDGKVIATKLSDTTEALIDKLLAAGVTRIRIRSALVCESKIGV
CATCYGRSLATGKPVDVGEAVGIIAAQSIGEPGTQLTMRTFHMGGTAGQDITHGLPRVQE
LFEARVPKGVAPISEVEGRVRIEETDKSRKIIVVPDDGSDEVSYQVPMRAPLLVQDGQRV
EVGQQLVQGTVNPHEILRILGPRAVQQHLVSEVQEVYKSQGVSIHDKHIEIIVRQMLKRV
NVLESGDTKLLPGEMIERPKFEEINRRVVAEGGQPASARPVLLGITKASLATESWLSAAS
FQETTRVLTENAIHGKSDPLLGLKENVIIGKLIPAGTGMPQYRNIRVEPTEEAKASMYSV
SSYEEPSEYTFGQGSGEAVPLEDYDFGSYNR
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggattggtctcgcgaccgctgacgacatc
cgtcagtggtcgcacggcgaggtcaaaaagccggaaaccatcaactaccggaccctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggtaagtacaagcgggtccgcttcaagggcatcatttgcgaacgctgcggtgtc
gaggtcacgcgggccaaggtgcggcgggaacgcatgggccacatcgagctggccgctccc
gtcacccacatctggtacttcaagggcgtgcccagccgcctgggctacctcctcgacctc
gcacccaaggacctggagaaggtcatctacttcgcggcctacatggtcacctgggtggac
accgaggcccgcgagcgcgacctgccgtccctggaagcccagatctccgtcgagcggcag
cacctcgagcagcgccgcgactccgcgatcgaggagcgccaccgcaagctcgaagccgac
ctggccgaactggaggaacagggcgccaaggcggatgcccgccgcaaggtgcgcgaggcc
gccgagcgggagatccggcagatccgcgaccgcgcccagcgggagatcgaccgcctcgaa
gaggtctggaaccgcttcaagaacctcaaggtccaggacctcgaaggcgatgagcagctc
taccgcgaaatgcgggaccgcttcggcaagtacttccgcggcggtatgggcgcccaggcg
atcaaggagcggctggccaacttcgacctggaggccgaagccgagaagctccgcgagatc
atccgcacgggcaagggccagaagaaggcccgcgccctcaagcggctcaaggtcgtctcg
gcgttcctcaacacccgcaacagcccgatgggcatggtgctggactgcgtcccggtgatc
ccgccggacctgcgtcccatggttcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgtcgggtcatcaaccgcaacaaccggctcaagcggcttctcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcgcatgctccaggaggccgttgacgcg
ctgttcgacaacggccgccgcggccgccccgtcaccggtccgggcaaccgtccgctcaag
tccctgtccgacatgctcaagggcaagcagggacggttccgccagaacctgctgggtaag
cgcgtcgactactctggccgctcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggcctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccatgcgcagaacatcaagagcgccaaacgcatggtggagcgggcccgg
cccgtggtgtgggacgtgctggaggaagtcatctccgagcaccccgtcctgctcaaccgg
gcgccgaccctgcaccgcctgggcatccaggcgttcgaaccgcagttggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggcgaccag
atggcggtccacctgccgctgtcggcggaggcccaggccgaggcgcgcatcctgatgctc
gccacgaacaacatcctcaagccctccgacggcaagccggtcaccatgcccacccaggac
atggtcatcggcctgtactacctgaccaccatgaaggagggtgcgaagggagaaggccgg
gcgttcagcaacatcggcgaggccatcatggcctacgacctcggcgaactcgacctgcaa
gcgaagatcaaactgcgggtcgagggcgacacggtgccgccggtgaactgggagccgccc
gaggactaccagccgggccagccgtacatcctggagaccaccctcggccggtacctgttc
aacgagaccacgcccgaggactacccgttcgtcaaccagcagatgggcaagaagcagttg
tccgcgctggtgaccgaactggcggagaagtactcgaaggtccaggtggctaccaccctg
gacgccctcaaggacgccggatactactgggcgacccgttcggggctgaccatcagcatc
agcgatgtgatcccgccgccgaacaagcagcagatcctcgacaagtacgagcagcaggcc
cagaagatccagcgccagtacgagcgtggtctgatcagcgacgacgaacgccgccaggag
ctgatccacatctggaccaaggccacggacgaagtggccaaggacatggaggagaactcg
cctccggacaacccggtctggatgatggtcaactccggatcccgcggtaacccgctgcag
gtccggcagatcgccgctatccgcggcctggtctccaacaccaagggtgagacgattccg
cggccgatcaagtcctcgtaccgcgagggcctaacggtgctggagtacttcatctccacc
cacggccagcggaagggtctggcggacaccgcgctgcgtaccgccgactccggatacctc
acccgtcgtctcgtggacgtcgcccaggacgtcatcgtccgcgaggtcgactgcggcact
gaccgtttcctgtggcaggagatcggcgaacggcgccccgacggcacgattgtgcgcaag
cacaacgtcgagaacaccggtttcggccggactctcgccgaagacgtggtggtcgacggc
aaggtcatcgcgaccaagctgagcgacactaccgaggcgctgatcgacaagctgctcgcc
gccggggtcacccggatccgcatccgcagcgcactggtgtgcgagtccaagatcggggtg
tgcgccacctgctacggccgctccctggccacaggcaagccggtcgacgtcggtgaggct
gtcggtatcatcgccgcccagtccattggtgagcccggtacccagctgaccatgcgtacc
ttccacatgggtggtacggcgggtcaggacatcacccacggtctgccccgtgtccaggag
ctgttcgaggcccgcgtccccaagggcgtggccccgatcagcgaagtggagggccgggtc
cggattgaggagaccgacaagagccgtaagatcattgtcgtcccggacgacggctccgac
gaggtcagctaccaggtgcccatgcgggctccgctgcttgtccaagacgggcagcgcgtc
gaagtcggtcagcagctcgtccagggtacggtcaacccgcacgagatcctgcggatcctc
ggcccgcgcgcggtgcaacagcacctcgtctccgaggtccaggaggtctacaagtcgcag
ggtgtctcgatccacgacaagcacatcgagatcatcgtgcggcagatgctcaagcgggtg
aacgtcctcgagtccggtgacactaagctgctgccgggcgaaatgatcgaacgtcccaag
ttcgaggagatcaaccgccgcgtcgtggccgaaggcggccaacccgcttcggctcgtccc
gtcctcctcggcatcacgaaggcgtcgttggccacagaatcgtggctctccgcggcctcc
ttccaggagaccacccgggtgctcaccgagaacgccattcacggtaagagcgacccgctg
ctcggtctcaaggagaacgtcatcatcggtaagctcatcccggccggtaccggtatgccg
cagtaccggaacatccgggttgagcccactgaggaggccaaggcctcgatgtactcggtt
tcctcctacgaggagcccagtgagtacaccttcggccagggatccggtgaggccgttccg
ctggaggactacgatttcgggtcctacaacaggtaa
DBGET
integrated database retrieval system
