Thermobifida fusca: Tfu_2875
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Entry
Tfu_2875 CDS
T00265
Name
(GenBank) HhH-GPD:Iron-sulfur cluster loop
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
tfu
Thermobifida fusca
Pathway
tfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tfu_2875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfu03400
]
Tfu_2875
Enzymes [BR:
tfu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Tfu_2875
DNA repair and recombination proteins [BR:
tfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tfu_2875
Prokaryotic type
Tfu_2875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AAZ56908
UniProt:
Q47KW4
LinkDB
All DBs
Position
3384693..3385568
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AA seq
291 aa
AA seq
DB search
MTANPYRTAVLAWYDANARDLPWRSAEVTPWGVLVSEVMLQQTPVARVLPAWQAWMERWP
TPKDLAADSAGEAVRMWGRLGYPRRALRLHACATVIVERHGGTVPDSYDELLALPGVGAY
TAAAVASFAFQQRHAVLDTNVRRVLERLVNGRQYPPRTPTKAEYRLAESLLPEEPAVAAR
WGVAVMELGALVCTARSPRCGVCPVVDQCAWVLAGCPPHDGPPRRGQRYAGTDRQVRGRL
LAVLREASGPVPKSMLDAVWDDAVQRERALDSLVADGLVDPLETGEYALPN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaacccctaccgtacagccgttctcgcctggtatgacgccaacgcacgggat
ctcccgtggcgctccgcggaggtgaccccgtggggtgtgctggtgagcgaggtgatgctc
cagcagaccccggtggcgcgggtgctgcccgcctggcaggcgtggatggaacgctggcct
accccgaaggacctggcggccgattctgcgggggaagccgtgcggatgtgggggcggctc
ggctatccgcgtcgtgcgctgcggttgcacgcgtgtgcgacggtgatcgtggagcggcac
ggcggcacagtgccggactcgtacgacgaactgttggcgctgcccggggtgggggcatac
acggcggccgcggtggcgagtttcgcgttccagcagcggcatgcggtgttggacacgaac
gtgcggcgtgtcttggagcggctggtgaacgggcggcagtatccgccgcgaacccccacg
aaagccgagtaccggctggcggagtcgttgcttccggaggagcccgcggtagcggctcgg
tggggggtcgcggtgatggagctgggtgcgctggtgtgtacggcgcggtcgccccgctgc
ggggtgtgcccggtggtggaccagtgcgcgtgggtgctcgcggggtgtcccccgcatgac
gggccgccgcggcgcggccagcggtatgcggggacggaccgccaggtccgcggccggctg
ttggcggtgctgcgggaagcgtccggtccggtgccgaagtcgatgttggacgcggtgtgg
gatgacgcggtccagcgggaacgggcgttggacagtctggtggctgacggtctggtggac
ccgttggagacgggcgagtacgcgctgcctaactga
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integrated database retrieval system
