Tsuneonella flava: IDJ81_01415
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Entry
IDJ81_01415 CDS
T07616
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tfv
Tsuneonella flava
Pathway
tfv03030
DNA replication
tfv03410
Base excision repair
tfv03420
Nucleotide excision repair
tfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IDJ81_01415 (polA)
03410 Base excision repair
IDJ81_01415 (polA)
03420 Nucleotide excision repair
IDJ81_01415 (polA)
03440 Homologous recombination
IDJ81_01415 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfv03032
]
IDJ81_01415 (polA)
03400 DNA repair and recombination proteins [BR:
tfv03400
]
IDJ81_01415 (polA)
Enzymes [BR:
tfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IDJ81_01415 (polA)
DNA replication proteins [BR:
tfv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IDJ81_01415 (polA)
DNA repair and recombination proteins [BR:
tfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IDJ81_01415 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IDJ81_01415 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DprA_N
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QSB44862
LinkDB
All DBs
Position
288877..291723
Genome browser
AA seq
948 aa
AA seq
DB search
MADKQHLYLVDGSAYIFRAYHRLPPLTNPEGTPVGAVYGYTTMLWKLAEDLHTADGPTHL
AVVLDKSSKSFRNDIYDQYKANRPEPPEDLRPQFPLIRDATRAFSLPLVEEPDVEADDMI
ASYARAAAAQGWDVTIVSSDKDLMQLVGPGKDGTGAIDMLDTMKNARIGVPEVEEKFGVA
PELVGDVLALMGDSVDNIPGIFGVGPKTASKLIAEHGSLTAALDSAAEMKKSKLKERLIE
HRADAELSRVLVTLKEDCPLPIPLEDMKLEGVPPGPLADFLTAHGFTSLLRRLDTGAGSP
SRKTDLNPAKQENAGTKPAEAGTGNRQPLPDMPPVDRTAYTCVQTADVLQQWIDRAFAAR
LVAVDTETSALDAISADLVGVSLALGPNDACYIPLAHGGSDMFAERPEQIALDTTIAMLK
PLLESDAVVKVGQNIKYDLNVLARHGIAVSPIEDTMILSFVLDAGRGTDGIGGGHGMDEL
SVRHLGHAPLAFKDVCGTGKKAIPFGEVPLDRATEYAAEDADVTWRLYKHLKPRLAIEGG
TRVYERVDRPLIPVVARMEREGIKVDRAALSRLSEEFAAQIGTLEKQIHELAGEEFTVGS
PKQLGDILFDKLGHKGGKKGKSGQYSTDQSVLERLAGDGAEIATKVLEWRQLSKLKSTYT
DALQAAINPTTGRVHTSYSLVGAQTGRLSSTDPNLQNIPIRTAIGRQIREAFVPEEGNVL
LAADYSQIELRLAAHMADVPALKEAFEAGEDIHARTAKEMYGEVTRDTRAAAKTINFAIL
YGISRWGLAGRLGIEPDEAQAMITRYFERFPGIQKYIAHTLESVRERGYSETLFGRKTWF
PRIESKNQAERQGSERAAINAPIQGTSADIIKRAMARMMPALADAGLQNVRMLLQVHDEL
VFELPEGDVDAAKPVIERVMAEAALPSVKLSVPLGIEIGTGKSWDAAH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagcagcatctctatctcgtcgacggttcagcctatattttcagggcttat
catcggctgccgccgctgaccaatcccgaagggacaccggtgggcgcggtctatggctac
accacgatgctgtggaaactggcggaagatctgcacaccgccgatggccccacccatctg
gcggtggtgctcgacaaatcgagcaagtcgttccgcaacgacatctacgatcagtacaag
gccaatcgccccgaaccgccagaggatttgcgcccgcaattcccgctgatccgcgatgcc
acccgcgcattcagcctgccgctggtggaagagccggatgtcgaggcggacgatatgatc
gccagctatgcccgcgccgctgccgcgcaagggtgggatgtcactatcgtcagttcggac
aaggatctgatgcagctcgtcgggccgggcaaggatggcaccggcgccatcgatatgctc
gacacgatgaagaacgcccgtatcggcgtgcccgaagtggaggagaaattcggtgtcgcc
cccgaactggtgggagacgtcctcgcgctgatgggggattcggtcgataacattcccggc
attttcggggtcgggccgaaaaccgcctcgaaactgatcgcggaacacggatcgctgacc
gccgcgctcgattccgcagcggagatgaagaagtccaagctgaaagagcggctgatcgaa
catcgggccgatgccgaactgagccgggttctggtgactctgaaggaagactgcccgctg
ccaatcccgctggaggatatgaagctggaaggcgtgccccccggcccgctggccgatttc
ctgaccgcgcacgggttcaccagcctgctgcggcggctcgacaccggcgcaggcagcccc
tcgcgcaagaccgatctcaatccggcaaagcaggaaaatgccggcacgaagcccgccgaa
gccgggactggcaaccgccagccattgcccgatatgccgccggtggaccgcaccgcctat
acctgtgtgcagaccgccgacgtattgcagcaatggatcgatcgcgcgttcgccgcccgt
ctggtggcggtcgataccgaaaccagcgcgctcgatgcgatttccgccgatctggtcggc
gtgagtctggcgctggggccgaacgatgcctgctatatcccgctcgcccacggcggcagc
gatatgtttgccgaacggcccgaacagatcgccctcgataccaccatcgccatgctcaag
ccgctgctggaaagcgatgcggtggtgaaggtgggccagaatatcaaatacgatctcaac
gtgctggcccggcacggcatcgctgtcagcccgatagaggatacgatgatcctcagcttc
gtactcgatgccgggcgcggcaccgatgggatcggcggcgggcatgggatggacgagctg
tcggtccgccaccttggccatgccccgctggcattcaaggacgtgtgcggcacaggcaag
aaagcgatcccgttcggtgaagtcccgctcgaccgcgccaccgaatatgccgccgaggat
gccgacgtaacctggcggctgtacaaacatctgaaaccgcggctcgccatcgaaggcggc
acccgcgtttatgaacgggtggaccgtccgctgatcccggtcgtcgcccggatggagcgc
gaagggatcaaggtcgaccgcgccgcgctgtcgcggctgagcgaggaatttgccgcgcag
atcggcacgctggaaaaacagatccacgaactcgcgggcgaggaattcaccgtcggcagc
cccaaacagctcggcgatatcctgttcgacaagctgggccacaaagggggcaagaaaggc
aagagcgggcaatattcgaccgatcagtcggtgctcgaacggctcgccggggatggtgcg
gaaatcgccaccaaagtcctcgaatggcggcaactgtccaagcttaagagcacctatacc
gatgcgctgcaggcggcgatcaatccgacgaccgggcgggtgcataccagctacagcctc
gtcggcgcgcagaccgggcggctcagctcgaccgatcccaacttgcagaatatcccgatc
cgcaccgccatcggccgccagatccgcgaagcatttgtgccggaagagggcaatgtcctg
ctcgctgccgactattcgcagatcgaactgcggctcgcggcgcatatggccgatgtgccg
gctctgaaagaagccttcgaagcaggggaggacatccacgcccgcaccgcgaaggaaatg
tacggcgaagtcacccgcgatacccgcgccgccgccaaaacgatcaacttcgccatcctg
tacggcatcagccgctggggtctggcgggccggttggggatcgaaccggacgaagcgcag
gcgatgatcactcgctatttcgaacgctttcccggcattcagaagtatatcgcccatacg
ctcgaaagcgtgcgcgaacggggttattccgaaacgctgttcggtcgcaagacatggttc
ccgcgcatcgaatcgaaaaatcaggccgaacggcagggcagcgaacgcgccgcgatcaac
gccccgatccagggcaccagcgccgatatcatcaaacgcgcgatggcccgcatgatgccc
gctctggccgatgccggattgcagaacgtgcgtatgctgctgcaagtgcacgacgaactg
gtgttcgaattgcccgaaggcgatgtcgatgcggccaagccggtgatcgaacgcgtgatg
gccgaagcggccctgccctccgtcaaactctccgtcccgctcgggatcgagatcggcaca
ggcaagagctgggacgcggcgcactaa
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