Tsuneonella flava: IDJ81_02065
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Entry
IDJ81_02065 CDS
T07616
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tfv
Tsuneonella flava
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfv03016
]
IDJ81_02065
Enzymes [BR:
tfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IDJ81_02065
Transfer RNA biogenesis [BR:
tfv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IDJ81_02065
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QSB44978
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All DBs
Position
422040..422660
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AA seq
206 aa
AA seq
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MTVHFHEEDLPAGVLAGDGPIAVDTETMGLVTHRDRLCVVQLSDGGPDEHLVRFKVGSDY
RAPNLKALLGDPNRLKLYHFARFDLAAIEYYLGTMAAPVFCTKIASKLTRTYTDRHGLKN
IVTELLGGEISKQQQSSDWGAPELTEAQRDYAASDVRYLHRLRDVLAGRLEREGRTEIAQ
ACFDFLPTRARLDMAGWADKDIFSHE
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgacagtacatttccatgaagaggatctgcccgccggtgtgctggcaggcgacgggccg
attgcggtcgataccgaaacgatgggtctggtgacgcatcgcgaccggctgtgcgtggtg
cagctgagcgatggcgggccggacgaacatctcgtgcggttcaaggtgggcagcgattat
cgcgcgcccaacctcaaggccttgctgggcgatccgaaccggttgaaattgtaccatttc
gcccggttcgacctggcggcaatcgaatactacctcggcacgatggccgcgccggtgttc
tgcaccaagatcgccagcaagctgacccgtacctataccgaccgccacggactgaagaac
atcgttaccgaactgctcggcggggagatttccaagcagcagcagtcgagcgactggggc
gcccccgaactgaccgaagcgcagcgtgactatgccgcgtcggacgtgcgctatctccac
cggctgcgcgatgtactggccgggcggctggaacgcgaaggccgcaccgaaatcgcgcag
gcgtgcttcgattttctgcccacccgcgcccggctcgacatggccggctgggcggacaag
gacatattcagccacgagtag
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