Tsuneonella flava: IDJ81_02770
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Entry
IDJ81_02770 CDS
T07616
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tfv
Tsuneonella flava
Pathway
tfv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IDJ81_02770 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfv03400
]
IDJ81_02770 (xth)
Enzymes [BR:
tfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IDJ81_02770 (xth)
DNA repair and recombination proteins [BR:
tfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IDJ81_02770 (xth)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
GINM1_C
Motif
Other DBs
NCBI-ProteinID:
QSB45095
UniProt:
A0ABX7KA14
LinkDB
All DBs
Position
complement(568426..569199)
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AA seq
257 aa
AA seq
DB search
MRIASFNINGVKARLPRLIEWLEETRPTVACLQEIKSQDEGFPAEAFEKIGYRAIWHGQK
GFNGVAILADGIEPVETQRTLPGDPDDDHSRYIEADVNGVRIACIYLPNGNPVPGPKFEY
KLAWMERLRARMRDLWDQEIPCAVVGDFNVIPEDKDVWSPKAMAADALMQPESRDAYARL
LGDGWTDAIDTLNPRGGVWTFWDYQAGGWQRDHGFRIDHLLLSPELADRMTAAGVDREYR
GREKASDHTPVWVDIAG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcatccttcaatatcaacggcgtcaaagcacgcctgccccgcctgatcgaa
tggctggaagaaacccggcccacggtcgcctgcctgcaggaaatcaaaagccaggacgaa
ggcttccccgccgaggctttcgagaaaatcggctatcgcgcgatctggcacggccagaag
ggctttaacggagtcgccattctggccgatgggatcgaacccgtcgaaacccagcgcacc
ctgccgggggacccggacgacgatcattcgcgctatatcgaagccgacgtgaacggggtg
cggatcgcatgcatctatcttcccaatggcaatccggtgccggggccgaaattcgaatac
aagctggcatggatggaacgactgcgcgcccgcatgcgcgatttgtgggatcaggaaatt
ccctgcgcggtagtgggcgatttcaacgttattccagaagataaagacgtctggtcgcct
aaggcgatggccgccgacgcgctgatgcaacccgaatcgcgcgatgcctatgcccgttta
ctgggcgatgggtggaccgatgccatcgatacactcaacccgcgcggcggggtgtggacg
ttctgggattatcaggctggcgggtggcagcgggaccacgggtttcgcatcgatcacttg
ctgctcagccccgaactggccgaccggatgaccgctgccggggtcgatcgtgagtatcgc
ggacgcgaaaaagccagcgatcacacccctgtgtgggtggatatcgctggctaa
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