Tsuneonella flava: IDJ81_03585
Help
Entry
IDJ81_03585 CDS
T07616
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tfv
Tsuneonella flava
Pathway
tfv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IDJ81_03585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfv03019
]
IDJ81_03585
03009 Ribosome biogenesis [BR:
tfv03009
]
IDJ81_03585
Enzymes [BR:
tfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IDJ81_03585
Messenger RNA biogenesis [BR:
tfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IDJ81_03585
Ribosome biogenesis [BR:
tfv03009
]
Prokaryotic type
rRNA helicases
IDJ81_03585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QSB46007
LinkDB
All DBs
Position
746223..748103
Genome browser
AA seq
626 aa
AA seq
DB search
MPFSNLPPVLAEAIAARGYAAPTAVQAAVLAPDAAGRDLIVSAQTGSGKTVAFGLAFAEN
LLDSEGRMPHTESPLALIIAPTRELALQVSRELAWLYAGAGGRIATCVGGMDASKERRNL
RGGAQIVVGTPGRLRDHLERGALDLSALRVAVLDEADEMLDMGFRDDLEEILDATPQGRR
TMLFSATMPRPIVALATRYQNDALRISTVGDERGHGDIAYQAVTVSPAEIEAAVVNLLRF
HEAETAILFCATRDNVRRLHAMLQERGFAVVALSGEHSQSERNQALQALRDRRARVCVAT
DVAARGIDLPTLSLVIHVEIPRDAETLQHRSGRTGRAGKKGTAVIVVPYPRRRRVESMLR
GAKIEAEWIDAPTKAAIQEQDRERLLGALLQPVEFEEEDRALAQRLMAEKSPEDIAAALV
RAHRAAMPAPEDLTENTPEARKTAQQERHRPGFEDTVWFSMAIGRRHNADPRWILPLLCR
RGHITRNEIGAIRIGGNETHFQIPRAIASRFTDAVERTAQGDDDQAAILIEPSEGPREAA
RDNRAGRREFGGKPSRHGGKGPRRANDGDRAFGKGPQKPGGKFAGKKPGKGPGGKGFGPK
ASGPNGGGSKTFGPKGGKPKGHAPKG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttccaatctcccccccgtccttgcagaggcgattgccgcgcgcggctatgcc
gcacccaccgccgtgcaggccgctgtccttgcccccgatgccgccgggcgcgacctgatc
gtttccgcgcagaccggttcgggcaagaccgtggcgttcggcctcgccttcgcggaaaac
ctgctcgattctgaaggcaggatgccgcacaccgaatcgccgctggcactgatcatcgcg
ccgacgcgtgaactggccttgcaggtcagccgcgagctggcctggctctatgccggtgca
ggcgggcgaatcgcaacgtgtgtcggcgggatggatgcatcgaaagaacgccgcaatctg
cgcggcggtgcacagatcgttgtcgggacgccgggccgcctgcgcgaccatctggagcgt
ggcgcgctcgacctgtcggccttgcgcgtcgctgtgctcgacgaagcggacgagatgctc
gatatgggcttccgcgacgatctggaagaaatcctcgatgccacgccgcaagggcgtcgc
acgatgctgttttccgctacgatgccgcgcccgatcgtggcgctggccacccgttaccag
aacgatgccctgcgtatttcgactgtgggtgacgaacggggccacggcgatatcgcctat
caggcggtcactgtctcacccgccgaaatcgaagcggcggtggtcaatctgctgcgtttt
cacgaggcggaaacagcgatcctgttctgcgccacgcgcgacaacgtccgccgtctgcac
gccatgttgcaggaacgcggctttgctgtcgttgctttgtcgggcgaacattcgcagtcg
gaacgcaatcaggcgttgcaggcattgcgcgaccgccgcgcacgggtttgcgtggcgacc
gacgtggccgcgcgcgggatcgacctgccgacgctgagcctggtgatccatgtcgagatt
ccccgcgatgcggaaacgctgcaacaccgttcgggccgcaccgggcgtgcgggcaagaaa
gggactgcggttatcgtggtcccttatccacgccgtcgccgggtggaatcgatgctgcgc
ggagcgaagatcgaagccgagtggatcgatgcgccgaccaaggccgcgattcaggaacag
gaccgcgagcgtttgctcggtgcgctgctccagccggttgagttcgaagaggaagaccgc
gcgctggcgcagcggctgatggcggaaaagtcgccggaagatatcgccgccgcactggtg
cgcgcccatcgtgcggcaatgcctgcgcccgaagatctgaccgagaacacccccgaagcg
cgcaaaacggcgcagcaggaacgccatcggcccggtttcgaagataccgtgtggttcagc
atggccatcgggcggcggcataatgccgatccgcgctggattctgccgctgctgtgccgc
cgtgggcatatcacccgcaacgaaatcggcgcgatccgtatcggcgggaatgaaacccat
tttcagataccgcgcgcgatcgccagccgctttaccgatgcggtcgaacgcaccgcacaa
ggtgacgacgatcaggctgcgattctgatcgaaccatccgaaggcccgcgcgaagcggcg
cgcgacaatcgcgcaggcaggcgcgagtttggcggcaagccgtcccgtcacggtggcaag
ggcccgcgccgcgccaacgatggcgaccgcgcctttggcaaggggccgcaaaagcccggt
ggcaaatttgctggcaagaaacccggcaaaggaccgggcgggaaaggttttgggccaaaa
gcttcagggccaaacggtggcggatcgaaaacgttcggccccaaaggcggcaagccgaag
gggcacgcgccgaaaggctga
DBGET
integrated database retrieval system
