KEGG   Tsuneonella flava: IDJ81_03965
Entry
IDJ81_03965       CDS       T07616                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
tfv  Tsuneonella flava
Brite
KEGG Orthology (KO) [BR:tfv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfv03400]
    IDJ81_03965
Enzymes [BR:tfv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IDJ81_03965
    5.6.2.6  RNA 3'-5' helicase
     IDJ81_03965
DNA repair and recombination proteins [BR:tfv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    IDJ81_03965
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QSB45295
UniProt: A0ABX7KEX1
LinkDB
Position
826210..828687
AA seq 825 aa
MTVPPEIDRWFAGRGWRVRRHQAEMLDASDDGRDALLVADTGAGKTLAGFLPTLADFCPS
RLDGTPVPEGLHTLYVSPLKALAHDVQRNLMAPIEEMGLPIRVETRSGDTPSDRKKRQRA
RPPHVLLTTPESLSLLLSYPDSLAMFASLRRIVIDEVHAFATGKRGDLLALALSRLQAIA
PQMQRAALSATVADPQAFREWLAPWGDIDRVALVEGEQGAPPHVEILLPEGERVPWGGHA
GRWAIPQLYEEIRRNRTTLVFTNTRFLAEFVFELLWDANDDNLPIGIHHGSLSKEARRKV
EGAMARGELRALVATASLDLGVDWGDIDCVVQMGAPKGSSRLLQRIGRANHRLDQPSRAI
LVPGNRFEFLEAMAAKDAVDAGQRDGEDFRPGSLDVLAQHVMACACAGPFGERALMAEVR
SSLAYAWIDAEVWQRVLDFVATGGYALKAYDRFHRIVREPGGVNGDANGRATWRLAHPEH
AARHRMNAGIIVDSEMLDVRFRNGRSLGKVEERFAAALSPGDTFRFAGMTLEVEQIKDME
LQVRASKSAATIPSYGGQRLPLTTHLAGRVREMLVDRAGWARFPDDVREWLEVQDWRSRM
PGPGQLLVESFPHGRKHFSVYYTFEGWNANQSLGMLITRRMEERGLSPGGFIANDYSLAV
WGLRPVTDPAPLLSPDILAHEFVDWVTESHLLRRAFREVAVISGLVERQHPGKRKSGKQV
TFSTDLIYDVLRKYEPDHVLLEAAWADARSRMTDVARLADLLDRAARELDHVTLDRVSPL
AVPVMTMIGREDVPQGAIDDELLLEAETLAATAMRTEWPHISDED
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgacggtccctcctgaaatcgaccggtggttcgcggggcgtggctggcgcgtacggcgc
catcaggcagagatgctcgatgccagcgacgatgggcgcgatgctctgctggttgcagat
accggcgcaggtaagactctggccggctttctgccgactctggccgatttctgcccttcg
cggctggatggcacgccggtgcccgaagggctgcacacgctctacgtttcgccgctgaag
gctctggcgcatgatgtgcagcggaatctgatggccccgattgaagagatgggcctgccg
atccgggtggaaacgcgcagtggcgacacgccgtccgaccgcaaaaagcgccagcgcgcc
cgtccaccgcatgtcctgctcaccacgcccgaatcgctctcgctgctgctgagctatccc
gatagcctggcgatgtttgccagtctgcggcggatcgtgatcgatgaagttcacgccttt
gcaacgggcaaacgcggcgatctgctggcgctggccctcagccggttgcaggcgattgct
ccgcagatgcagcgcgcggcgctgtcggccactgtggccgatccgcaggcatttcgcgaa
tggctcgccccgtggggcgatatcgaccgcgtcgctctggtggagggagagcagggcgcg
ccgccgcacgtcgaaatcctgctgcccgagggggaacgggtgccgtggggtggccacgcg
gggcgatgggcgattccccagctctatgaagaaatccgccgcaatcgcacgacactggta
ttcaccaacacccgctttctggcagaattcgtgttcgagctgttgtgggatgccaatgac
gataacctgcccatcggcattcaccacggatcgctgagcaaggaagcccgccgcaaggtg
gagggcgcgatggcgcgtggggaactgcgcgcgctggtggcgacggcgagcctcgatctg
ggcgtcgactggggcgatatcgattgtgtggtgcagatgggtgctcccaagggatcgagc
cgtctgctgcagcggattgggcgcgccaaccacaggctcgatcagccaagtcgggcgatc
ctggtgcctggcaaccgtttcgaattcctcgaagcgatggccgcgaaagacgcggtggat
gcgggccagcgcgacggggaggattttcggccgggcagtctggatgttctggctcagcat
gtgatggcctgcgcctgcgccgggccgtttggcgagcgggcgctgatggccgaagtccgc
tcttcgcttgcctacgcgtggatcgatgcggaagtctggcagcgcgtgctcgatttcgtg
gcgacggggggatatgcactgaaagcctatgatcggttccatcgtattgtgcgcgaaccg
ggcggtgtgaatggcgatgcgaacggtcgcgcgacatggcgattggcccatcccgaacat
gccgcacggcaccgaatgaatgcaggtatcatcgtcgattccgaaatgctcgatgtccgg
ttccgcaacgggcgctcgctcggcaaagtcgaagagcgcttcgccgctgcgctcagcccc
ggcgacacatttcgctttgccgggatgacgctggaggtcgagcagatcaaggacatggag
cttcaggttcgtgccagcaaatcggccgcgacgattcccagctatggcgggcagcgtctg
ccactgaccactcatctggcgggccgggtccgagaaatgctggtcgatcgggcgggctgg
gcacgctttcccgatgatgtgcgcgaatggctggaagtgcaggactggcgcagccggatg
ccggggccggggcaactgctggtggaaagcttcccccatggccgcaagcatttcagcgtg
tactacactttcgaagggtggaatgcgaaccagagcctgggcatgttgatcacccggcgg
atggaagagcgcggcctttcaccgggcgggtttattgccaatgattattcgctggcggtg
tggggcctgcgcccggtaaccgatccggcaccacttttgtcgccggacatactggcgcat
gaattcgtcgattgggtgacggaatcgcacctgctgcgccgggcatttcgcgaagtggcg
gtgatatcggggctggttgaacgccagcatcccggcaagcgcaaaagcgggaagcaggtc
actttctcgaccgacctgatttacgatgtgcttcgtaagtatgagcccgatcacgtgctg
ctggaggcagcgtgggccgatgcccgatcacgcatgaccgacgtagcacggctggccgac
ctgctcgaccgggcggcgcgagagctcgaccatgtgacactcgaccgggtcagtccgctg
gcggttccggtgatgacgatgattggtcgggaagacgtaccgcaaggcgcgatcgacgat
gaactgctgctggaagctgaaacgttggcagccacggccatgcggaccgagtggcctcat
atatcggacgaagattaa

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