Tsuneonella flava: IDJ81_07850
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Entry
IDJ81_07850 CDS
T07616
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tfv
Tsuneonella flava
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfv03016
]
IDJ81_07850 (rnd)
Enzymes [BR:
tfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IDJ81_07850 (rnd)
Transfer RNA biogenesis [BR:
tfv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IDJ81_07850 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QSB43329
UniProt:
A0ABX7K527
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All DBs
Position
complement(1703055..1704314)
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AA seq
419 aa
AA seq
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MKIHDLITTTEALADLCERLAQSDFVTVDTEFMRENTYWPELCLVQIANTEEAAAIDPLA
EGIDLQPLLDLMCDNEDVLKIFHAGGQDVEIIYNLTGKTPHPIFDTQIAMMAISQSEQIG
YANLVEAWLGLTIDKGARFTDWSRRPLTERQIEYAIGDVTHLSKIFPKILKKLIKTERGS
WLDAEMDKLADPSNYANDPGKAWQRIRAPSRNAAVLGRLKDLAAWREGEAQHKNIPRGRI
MRDETLADLASHPPKKQADLVKVRGLSNAWKDNDIGKRLMKVLEAAEPLGKDEMPDKPKR
GAPLGKEGALVADLLKLLLKIRSREIDVASRLLTRSDEMEALAAGIRDLPILKGWRYEVF
GRDALDLVEGKLAFAVENGRLKMTHIDDVEPGDRTSETDGTETASDVDDAAGDEALAAE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacatgacctgattaccactaccgaagccctcgccgatctgtgcgaaaggctg
gcgcaaagcgatttcgttaccgtcgataccgaattcatgcgcgagaacacctactggccc
gaactgtgcctggtgcagatcgccaataccgaagaggcagcggcgatcgatccgctggcc
gaggggatcgatctgcaaccgctgctcgatctgatgtgcgacaacgaagacgtgctgaaa
atcttccacgccggggggcaggatgtggaaatcatctacaacctcaccggcaagaccccg
cacccgattttcgatacccagatcgcgatgatggcgatcagccagtccgaacagatcggc
tatgccaatctggtggaagcatggcttggcctcactatcgacaagggcgcgcgcttcacc
gactggagccgccgcccgttgaccgaacggcagatcgaatatgccatcggggacgtgaca
catctttcaaaaatattccccaaaatactgaaaaaacttattaaaacagagcgtggatcg
tggctcgacgcggaaatggacaaactggccgatccgtcgaactacgccaacgatcccggc
aaggcatggcaacgcatccgcgcgcccagccgtaatgcagccgtgcttggccgtctgaaa
gatctcgccgcctggcgcgaaggggaggcgcagcacaagaatatcccgcgcgggcggatc
atgcgcgatgaaacgctggccgatctcgccagccatccgcccaagaaacaggccgatctc
gtcaaagtgcgcggcctgtcaaatgcttggaaagacaacgatataggcaaacgcctgatg
aaagtgctcgaagcggccgaaccgctcggcaaagacgagatgcccgacaagcccaagcgc
ggcgcgccgctgggcaaggaaggcgcgctggtggccgacctgctcaagctgctgctcaag
atccgcagccgcgaaatcgacgtggccagccgcctgctgacccgcagcgacgagatggag
gccctcgccgccggtatccgcgatctgccgatcctgaaaggctggcgatacgaagtgttc
gggcgcgatgcgctcgatctggtcgaaggcaagctggcgttcgcagtagagaacgggcgt
ctcaagatgacccatatcgacgatgtggaaccgggcgatcggaccagcgagaccgacggc
accgaaaccgccagcgacgtggatgatgcagcgggtgacgaggcactggcggcagaataa
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