Tsuneonella flava: IDJ81_09120
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Entry
IDJ81_09120 CDS
T07616
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tfv
Tsuneonella flava
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfv03032
]
IDJ81_09120
03400 DNA repair and recombination proteins [BR:
tfv03400
]
IDJ81_09120
Enzymes [BR:
tfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IDJ81_09120
DNA replication proteins [BR:
tfv03032
]
Prokaryotic type
DNA Topoisomerases
IDJ81_09120
DNA repair and recombination proteins [BR:
tfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IDJ81_09120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QSB46125
LinkDB
All DBs
Position
1963319..1964323
Genome browser
AA seq
334 aa
AA seq
DB search
MTKLIYVDDDLPGISRKRCGTGWAYYDPEGRLIRDKGEKRRLNAVALPPAYRDAWFCPAP
NGHILATGIDARGRKQYRYHPEFRTARESDKFDGCVTFGNLLPLVRKRVEEDLASRQLTR
ERAVASVVRLLDLGAVRVGNDSYARRNKSFGATTLRRRHAELTGKTLKLRYKGKGGKKRE
VVLSDASLAKVVRAMEDLPGQRLFQYLDEDGDHHAVSSSGVNAYLSETMGEHFTAKNFRT
WHASAMALAELAAAEDTLTMKELLGIVSGHLGNTPAVVRRSYVHPGVIALIERQEEWRRS
LDMPRATKWLSREERALLSLLETGPGAAELLSAA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctgatctatgtggacgatgatctgccgggcatatcccggaaacggtgcggc
accggctgggcatattacgatcccgaaggtcggttgatccgggataagggggaaaagcgt
cggctcaatgccgtcgcgctgcccccggcctatcgcgatgcgtggttctgccccgcgccc
aacgggcacattctggcgaccgggatcgatgcgcggggtcgcaagcaatatcgctaccac
cccgaatttcgtaccgcgcgtgagagcgacaaattcgacggctgtgtcacgttcggcaat
ctgcttccccttgtccgcaagcgggtggaggaagacctggcgtctcgccagctgacccgc
gaacgtgccgtggcgagcgtcgtccggttgctcgatctgggggcggttcgagtggggaac
gacagctatgctcgccggaacaagtctttcggcgcaacaaccctgcgccgccgccatgcc
gagctgacgggtaagacgctgaagctgcggtacaaaggtaaaggagggaagaagcgcgaa
gtcgttctgtcggatgccagcctggccaaagtggtgcgggcgatggaagacctgccgggc
cagcgattgttccagtatctcgatgaggacggggatcatcacgctgtttcgtcgagcggc
gtcaatgcctacctctctgaaacgatgggggaacattttacggccaagaatttccgcaca
tggcacgcgagtgcgatggcattggccgaactggctgctgcagaagatactttgaccatg
aaggaattgcttggtatcgtttccgggcatcttggcaatacccccgctgtggtgcggcgc
agttatgttcatcccggcgttatcgcgctgatcgaacgacaggaggaatggcgacggtca
ctggacatgccaagagcgactaaatggctttcgcgggaagaacgggcgctgctttccttg
ctcgaaaccgggccaggtgcggctgaactgttgtcggccgcgtga
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