Tsuneonella flava: IDJ81_10040
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Entry
IDJ81_10040 CDS
T07616
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tfv
Tsuneonella flava
Pathway
tfv03420
Nucleotide excision repair
tfv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IDJ81_10040
03430 Mismatch repair
IDJ81_10040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfv03400
]
IDJ81_10040
Enzymes [BR:
tfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IDJ81_10040
DNA repair and recombination proteins [BR:
tfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IDJ81_10040
MMR (mismatch excision repair)
Other MMR factors
IDJ81_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QSB43708
LinkDB
All DBs
Position
complement(2141610..2143916)
Genome browser
AA seq
768 aa
AA seq
DB search
MTDIAPLSNDGESAPIPSYAARLNSPQRDAVLTTEGPVLMLAGAGTGKTAALTARLAHLV
ATRRAWPSEILCVTFTNRAAREMRERVAGHIGDAVEGMPWLGTFHSIAAKMLRRHAELVG
LQSNYTIIDTDDQLRLLKAMIVEQKLDEKRWPARQLAGLLDRWKNRGLNPDDLDAVENEA
YANGRGQHFYRLYQDRLKALNACDFGDLLLHMLNILRREPEVLAHYQQRFKYIMVDEYQD
TNQVQYLWLRLLAQQRKNICVVGDDDQSIYSWRGAEVANILRFEKDFPGAKVIKLEQNYR
STPHILAAASGLIRENSERLGKTLWTEIEAGEKVRVIGVWDGPEEARRVGEEIERLEREG
LPLDQIAILVRAQYQTREFEDRFIQIGLNYRIVGGFRFYERAEIRDALAYLRVIAQPQDD
LAFERIYNQPKRGLGAKTLELMHRHARNTGLPLAAASLQLADSDELPKRASATIASLMGQ
FLHWRELAETVTPSELLRTVLDESGYDAMLQADKTAESAGRAENLSELARAMEEYGTLGD
FLEHVALVMDNDRADEGEKVTIMTMHAAKGLEFDHVFLPGWEEGVFPSQRSLDEGGLASL
EEERRLAYVAITRARRRCTIFHAANRRIYGQWTSSIPSRFVGELPADHITEESTLTGGAS
LWRAGLSEHNDPFAHVSSNRPDRSDSRGPGWQRALTTGYDTAPKRVKEATRSVASFAAKP
RTDIAVGQRVFHDKFGYGTVTDQDGNKLEIDFEQAGSKRVIDSFVSLA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatagcccccctctccaatgacggcgaatctgcgccgattccctcctatgca
gcgcggttgaactcgccccagagggatgccgtgttgaccaccgaagggccggtgctgatg
ctggccggagcgggcaccggcaagacagcggcgctcaccgcacgccttgcacaccttgtc
gcaacaagacgcgcctggcccagcgaaatcctgtgcgtcaccttcaccaacagagccgcg
cgggaaatgcgcgaacgcgttgcagggcatattggggatgctgtggagggaatgccctgg
ctcggcaccttccattcgatcgcggcgaagatgctgcgtaggcatgccgaactggtcggc
ctgcaatcgaactacaccatcatcgacaccgacgatcagttgcgcttgctgaaggcgatg
atcgtcgaacagaagctggatgaaaagcgctggcccgcccgacagctcgccgggctgctc
gaccgctggaagaatcgcgggctcaacccagacgatctcgatgcagtcgaaaacgaggcc
tatgccaatgggcgcggtcagcacttctatcgtctatatcaggataggttgaaggcgcta
aatgcctgcgatttcggcgatctgctgctgcacatgctgaacatcctgcgccgggagcct
gaggtgctggcccattatcagcagcgcttcaaatatatcatggtggacgaatatcaggac
accaatcaggtgcagtacctgtggctgcgtctgctggcacagcagcgcaaaaacatctgc
gtcgtgggggatgacgaccagtcgatctattcctggcgcggcgcggaagtcgccaacatc
ctgcggtttgagaaagattttccgggcgccaaagtcatcaagctggagcagaattatcgc
tccaccccgcatattctcgccgcggcatcgggtctgatccgtgagaacagcgaacggctt
ggcaaaaccctctggaccgaaatcgaagcaggcgagaaggttcgggtgatcggcgtgtgg
gacggaccggaagaagcccgccgtgtcggcgaggagatcgagcgactggagcgcgaaggt
ctgccacttgatcagatcgccattctggtgcgcgctcaataccagacgcgtgaatttgaa
gaccggttcatacaaatcggccttaactatcgaatagtcggcggctttcgcttttacgaa
cgcgccgaaatccgcgacgcgctggcctatttgcgcgtcattgcccagccgcaggacgat
ctggcattcgagcgaatctataaccagcccaagcgcgggctaggcgcaaagacgcttgaa
ctgatgcaccgccatgcgcgcaacaccggcctgccgcttgccgctgcgtcgctgcagttg
gctgatagcgacgaactgcccaaacgagcctctgccaccatcgccagtctcatggggcaa
ttcctccattggcgcgaattggcggagactgtcactccttccgaactgctacgcaccgta
ctggacgaaagcggttacgatgcgatgcttcaggcagacaaaaccgcggaaagcgccgga
agggcagaaaatctctccgaactcgcgcgcgcgatggaagagtacggcactttgggcgat
tttctcgaacatgtcgctctggtgatggataacgaccgcgccgatgaaggcgagaaagtc
accatcatgacgatgcatgcggccaaggggctggaattcgatcacgtattcctgcccggt
tgggaggaaggcgtgtttcccagccagcgctctctcgacgaaggcgggctggccagcctg
gaggaagaacgccgtctggcctatgtcgcgattacccgcgcccggcgacgctgcacgatc
tttcatgcggccaaccggcgcatttacgggcaatggaccagctcgatccccagccgtttc
gtcggggagctgcctgccgaccatataaccgaggaatcgacgctaacgggtggtgcctct
ctatggcgtgccgggctgagcgagcataacgatccctttgcccatgtttccagcaaccgc
ccggatcgctcggactcgcgcggccccggctggcaacgggcactgaccaccggatacgat
accgcgccaaagagggtgaaagaagccacccgctccgtcgccagctttgccgccaaaccg
cgcaccgatatcgctgtcggccagcgcgtattccacgacaaatttggatatggcactgtg
accgatcaggatggcaacaagctcgaaatcgatttcgagcaggccggatcgaaacgggtg
atcgacagcttcgtatcgctcgcctga
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