Tsuneonella flava: IDJ81_11815
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Entry
IDJ81_11815 CDS
T07616
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tfv
Tsuneonella flava
Pathway
tfv03420
Nucleotide excision repair
tfv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IDJ81_11815
03430 Mismatch repair
IDJ81_11815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfv03400
]
IDJ81_11815
Enzymes [BR:
tfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IDJ81_11815
DNA repair and recombination proteins [BR:
tfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IDJ81_11815
MMR (mismatch excision repair)
Other MMR factors
IDJ81_11815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_11
PNPase
Motif
Other DBs
NCBI-ProteinID:
QSB44022
LinkDB
All DBs
Position
2515443..2517344
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AA seq
633 aa
AA seq
DB search
MNVGSAPVETNVTRDDGVEDEIASYLDLENPKSFFLFAGAGSGKTRSLVNALRHIATKYR
DTLRLRARHVAVITYTNAACDEITRRLEYDPLFVVKTIHSFAWSQIQGFNSDIREWLRTN
LQTEIADLTAEEAKGRAGTKASAARLASIESKQRRLARLDEIKAFTYNPNSDNRERNALN
HSEVIKIFATFLLEKSLMQRMFVEKYPFLLIDESQDTNKTLIDALLTVQQAHASRFSLGL
IGDTMQRIYLDGKENIESALPPGWETPEKVLNHRCPKRIVRLINAIRSGADEQVQEPRDD
AIEGWARLFVFPVDTLDKPAMEDGVRAYMTTLTDDAGWSDRDQCKILTLEHHMAAKRMGF
EQLFEAIAPIEAFRTAFLDGSFAPSRFFTHSVLPLVTATQRGDKFLATKIIRETSPLLSK
DKLKGSEKPLDQLRTAQAAIDSLMSLWANGEPTCGAVLENVSGTNLFVVPDGLKAALAAS
RAEPVISEDDEEADPVGENIAALLTFLDCPFSMIAPYASYVAHEASFDTHQGVKGLEFDR
VMVLMDDGDARGFLFGYDKLLGAKAPSANDLKNAEEGKDSSLDRTRRLFYVTCSRAKSSL
ALVAYSTDPDAMKAHVTQSGLFNEDEVYLGLPT
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttggaagcgctccagtcgaaacgaatgtcacgcgcgacgacggggtcgaggac
gagatcgcgtcgtatctcgacttggaaaaccccaagagtttctttttgttcgccggtgct
ggctccgggaaaacccggtctctcgtcaacgcgcttcggcatatcgcgacaaaataccgg
gatacgcttcgtctgcgagcaaggcatgtcgcggtcatcacctacacgaacgccgcctgc
gacgagatcacgcgtcggctggaatacgatccgctcttcgtcgtcaaaaccatccatagc
tttgcatggtcgcaaattcaggggttcaactccgacatacgggaatggttgcgcaccaat
cttcaaacggaaattgccgatttgacggccgaagaggccaagggccgtgccggcacgaaa
gcgtccgctgcgcggctggcgtcgattgagtcaaagcagcgccgtcttgctcggctcgat
gagatcaaggctttcacttacaaccccaacagcgataaccgtgaacgcaacgctctcaat
cacagcgaagtcatcaagattttcgcgactttcctgcttgagaagtcgctgatgcagcgc
atgttcgtagagaaatatccattcctgctgatcgacgagagtcaggacacgaacaagacg
ctgatcgacgccctcctgacggttcaacaggcgcacgcgagccgtttctccttgggcctt
atcggcgacacgatgcagcgcatttacctcgacggcaaagagaacattgaaagcgcgttg
ccgccaggctgggaaacgcccgagaaggtgctgaatcaccgctgcccgaagcgcatagtg
cgtcttatcaacgccattcgatcaggcgcagacgagcaggttcaggaacctcgcgacgac
gcgattgaaggatgggcgcggctattcgtcttccccgtcgatacgctggacaagccagcg
atggaggatggggttcgcgcttatatgaccactctcaccgatgatgcgggttggagtgat
cgtgaccagtgtaaaattctcacgcttgagcaccacatggccgcaaagcggatgggtttc
gagcaactattcgaggcgattgcgccgatcgaggcgttccgcacagcgtttctcgacggt
agtttcgcgcctagccgattttttacgcacagcgttcttccgctggttacagccacccaa
cggggcgacaagttcttagcgactaaaatcatacgtgagacatcgccgctgttgagcaag
gacaagcttaaaggctcggaaaaaccgttggatcaactgcgcaccgcacaggcggcgatc
gatagcctgatgtcactctgggcaaacggtgaaccgacttgtggcgccgttctggaaaat
gtttcgggcaccaatctcttcgttgtgccagacggactcaaagccgccttggccgcatcg
agggcggagccggtcatttccgaagacgacgaggaagctgatccagtaggcgagaatatc
gctgcgctgctgacctttctggattgcccgttctcgatgatcgccccctatgcctcctac
gtcgcgcacgaggcctcttttgatacccatcaaggggtcaaggggctcgaatttgatcgc
gtcatggttctaatggacgacggcgacgcgcgcggatttctcttcggatacgacaagctg
ctgggagccaaggcaccgagcgccaacgatttgaagaatgcggaagagggcaaagattct
tcgctcgatcgcacgcgacggctgttttacgtcacctgcagccgagccaaatccagcttg
gcactagtggcgtactcgaccgatcccgacgcgatgaaagcgcatgtgacccagtccggc
cttttcaacgaggatgaggtgtatcttggtctgccgacatag
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