Tsuneonella flava: IDJ81_12470
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Entry
IDJ81_12470 CDS
T07616
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tfv
Tsuneonella flava
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfv03400
]
IDJ81_12470 (addB)
Enzymes [BR:
tfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IDJ81_12470 (addB)
DNA repair and recombination proteins [BR:
tfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IDJ81_12470 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QSB44140
LinkDB
All DBs
Position
complement(2657627..2660569)
Genome browser
AA seq
980 aa
AA seq
DB search
MPERIHPQVYSIAAHRGFADALVAGLIPRYSDSELGLARLTLLLPSTRAIRTVQEAFVRA
SGGGMLMPRMAVVGDLDLDETLGVLLDPLGAADIPPAVDPTRRWLRLAEILRAEMGDDAP
RGSALLRLASEFAATMDRLLVEDIGPQELLEERVMGVVGDLAEHWQRAVHRFARVQAIWL
AELAATGTIDAAARRNRLFDHAATQWRNNPPATPIVAAGVTSAAPALARLLRVVSELPLG
AVILPDLDLSMPQDVWAELGAAGACANPGDPPFSEGDAVTHPQYHLKLLLNRMGINRAEV
QQWHRKGVAAAPPERTHAISSLFLPPQASKIWVDLSAEKRRLSGVRVMETANPEEEAQAI
ALLIREAVSVPERRVALVTPDRPLARRVVQHLRRWNLEADDTAGRPLTLTAAGRVLLQLA
DIAAQRAAPVSLIAALANPLVRYGEGRGEWLRHLRALDEQLRGPRPTPGLTPVADIADEA
KVADWWAEVSPILAPLCQDGSLPLAEWLNRLAAAGEALCGDALWSREDGRALAQFVEDLR
LHARDVGTVLEADELHAALSDAMEGNSVRPPYGGHPRVAIYGLIESRMARADLVICAGLN
EGTWPARPATDPLLAPAVLRALGVPGADFRIGLAAHDLAAALGAPDVVLSRARRDEGGPA
IASRFLLRVQALLGDLLDRHVETEAVQLARALDDAPSALPYPQPEPRPDAQQRKVALSVT
GLDRLRADPYQFYAGSILRLDEMDALDADPGPAWQGELAHKILEVWHKTGRPIADIAEEQ
LAQMHAHPLTRALWRPRLLKALEWVEGQIAADPVRIPTLFEEWGSMEWNGVTIRGRIDRL
DRLEDGSYAVVDYKTGRPPSGAQVEAGYALQLGTLGLMVENGGFAKAIGKATRFEYWSLG
RSDKSETGFGYVTTPIREGAKRSGIAADAFLPKAREYLDDALNRWILGDEPFTARLNPDA
PGYATYDQLMRLDEWMGREQ
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagcgcatccatccgcaggtttattcgattgccgcacaccgcggttttgccgat
gctctcgttgccggactgatcccgcgatacagcgattcagagctgggccttgcccggctg
actttgctgctcccgtctacccgtgcgatccgcactgtgcaggaggcattcgtgcgggcg
tcgggtggcgggatgctgatgccgcgcatggcggtggtgggcgatctcgatctggacgag
acgctgggcgttttgctcgatccgctgggggctgccgatattccgccggcggtggaccca
acgcggcgatggttgcgacttgcggaaatactccgcgccgaaatgggcgacgatgccccg
cgcggttcggcgctgttgcgactggccagcgaattcgccgcgacgatggaccgtttgctg
gtggaggacatcggcccgcaggaactgctggaagagcgggtgatgggcgtggtgggcgat
ctggcagagcattggcagcgggcggttcatcgctttgcgcgggtacaggcgatctggctg
gcggaactggccgccacaggcacgatcgacgcggctgcgcggcgcaaccgtctgttcgat
cacgcagcgacccaatggcggaacaacccgcccgctacaccgattgttgccgctggcgtg
accagcgcggcgcctgcgctggcgcgattgctgcgggtggtatccgaattgccgctgggg
gcggtgatcctgccggacctcgacctgtcgatgccgcaagatgtgtgggccgaactgggc
gcggcgggtgcctgcgccaatcccggcgatccgccgttcagcgaaggcgacgcggtgacc
catccgcaatatcatctcaagctgttgctcaaccggatgggcataaaccgggcggaggtc
cagcagtggcatcgcaagggcgtcgctgcagctccgccagagcgcacccatgcgatatcc
agcctgttcctgccgccacaggcgagtaaaatctgggttgacctgtcagcggagaaacgc
cgcctctcgggtgtgcgggtaatggaaacggccaaccctgaggaagaggcgcaggccatc
gccttgctgatccgcgaagcggtttcggtgcccgaacgtcgagtggcgctggtcacaccc
gacaggccgctggcacggcgcgttgtccagcatctcaggcgctggaacctcgaagcggac
gacaccgcgggacggccgctgacgctgaccgccgcaggcagagtgctccttcaactggcc
gatatcgcagctcagcgggccgctccggtttcgctgattgcggctctggccaaccctctg
gttcgatatggcgaagggcgtggcgaatggcttcgccatctgcgtgctctggatgagcag
ttgcggggcccgcgcccgacacctggtctgacacccgttgctgatattgccgatgaagcg
aaggttgccgattggtgggcagaagtctccccgatcctcgcgccgctatgccaggatggc
agcttgccgcttgccgaatggctgaaccgtctggccgctgcaggggaagcgctgtgcggc
gatgcattgtggagccgcgaggatgggcgcgcgctggcgcagttcgtggaagatctgcgg
ctccatgcgcgcgatgtcggcactgtgctggaggcggacgagcttcatgccgcgctcagc
gatgcgatggaaggcaactcggtccgtcctccttatggcgggcatccgcgcgtggcgatt
tacggtctgatcgaatcccgcatggcgcgcgccgatctggttatctgtgccgggttgaac
gaaggcacctggcccgcacggcccgcaaccgatcctttgctggccccggcggtgttgcgg
gcgcttggcgtgccgggggcggatttccgcattgggctggcggcgcacgatctggctgcg
gcactgggtgcgcccgatgtcgtgctcagccgcgcgcggcgcgatgaaggcggcccggcg
attgcctcacgcttccttctgcgggtgcaggcgctgctgggcgatttgcttgatcgccat
gtagaaacggaggcggttcagctcgcgcgcgctctggacgatgcgccctccgcgctgcca
tatccgcagccggagccaaggcccgatgcacagcagcgcaaagtggcgctcagtgtcacc
gggctcgatcggctgcgcgccgacccctatcaattctatgccggttcgatcctccggctg
gacgagatggacgcgctcgatgccgatcccggtccggcgtggcagggggaactcgcgcac
aagatattggaagtgtggcacaagaccggtcgcccgattgctgacatcgcagaagagcaa
ctggcgcaaatgcatgctcacccgttgacccgtgcgctgtggcggccgcgtttgctgaag
gctctggaatgggtcgaagggcaaatcgccgccgatccggtccggatacccactctgttc
gaagagtggggcagcatggaatggaacggagtgaccattcggggccggatcgaccggctc
gatcgtctggaagacggcagctacgcagtcgtcgattacaagaccggtcgcccgcccagc
ggcgcacaggtggaggcaggttatgctcttcagcttggcacactggggctgatggtggaa
aatggcggtttcgcgaaggccatcggcaaggccactcggtttgaatactggtcgctgggg
cgcagtgacaagagcgaaaccgggttcggatatgtgaccacgccgatcagagaaggggcc
aagcgcagcgggatcgccgccgacgcgtttctgccgaaggcgcgcgaatatctcgacgat
gccctgaaccgctggatattgggggacgagccattcaccgcgcggctgaatcccgatgcc
cccggctatgcgacatatgaccagctcatgcggctcgatgaatggatggggcgcgaacaa
tga
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