Tsuneonella flava: IDJ81_13065
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Entry
IDJ81_13065 CDS
T07616
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
tfv
Tsuneonella flava
Pathway
tfv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IDJ81_13065 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfv03400
]
IDJ81_13065 (uvrA)
DNA repair and recombination proteins [BR:
tfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IDJ81_13065 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IDJ81_13065 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
nSTAND1
DnaJ_CXXCXGXG
AAA_25
AAA_29
AAA_21
ATPase
TylF
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
QSB44240
LinkDB
All DBs
Position
complement(2788741..2791644)
Genome browser
AA seq
967 aa
AA seq
DB search
MALTTISVRGAREHNLKGIDIDLPRDALIVVTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLEMMQKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGVP
YSPATGLPIEAQTVSNMVDRVMTLPEGTRLYLLAPVVRGRKGEYRRELAEWQKAGFARVR
IDGELYEIEQAPALDKKYKHDIEVVVDRLAVRPGIETRLADSFETALKLAEGLAYVDLAD
GVVPGREAEASAGGAMKGAGIPANRIVFSEKFACPVSGFTIEEIEPRLFSFNAPQGACPT
CDGLGEKLLFDPQLVVPNEQLSLKKGAVVPWAKSNPPSPYYMQVLNSLAKAYDFDLTTPW
EDLAQDQRDIILHGTGGLPVALTFKDGRKEYTVHKPFEGVIGNLNRRMMQTESAWMREEL
SKYQTAQPCEACGGKRLNEKALAVKVPGPNGPTDIATPTQMSVTLAKDWFLALPDHLTDQ
QNQIARAILKEINERLGFLDNVGLDYLNLDRTSGTLSGGESQRIRLASQIGSGLSGVLYV
LDEPSIGLHQRDNDRLLETLKRLRDLGNTVIVVEHDEDAIRTADHIVDLGPGAGVHGGQI
VAQGTLKDILKAKGSLTADYLTGRRKIAVPEQRRKGNGHHLTVHGARANNLRDVTAAIPL
GTFTCITGVSGSGKSSFTIDTLYASAARQLNGARVVAGAHDKVTGLEFCDKVIEIDQSPI
GRTPRSNPATYTGAFTNIRDWFAGLPEAQARGYKPGRFSFNVKGGRCEACQGDGLIKIEM
HFLPDVYVTCEECHGKRYNRETLEVKFKGMSIADVLDMTIEDAEEFFKAVPPIRDKMHML
NEVGLGYVKVGQQATTLSGGEAQRVKLAKELARRSTGQTLYILDEPTTGLHFEDVRKLLE
VLHRLVDQGNSVVVIEHNLDVIKTADWIVDLGPDGGVRGGEIVAEGTPEDVAANERSYTG
QYLRGML
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggcacttaccacgatttccgtgcgcggcgcgcgcgagcataacctcaagggtatcgat
atcgacctgccgcgcgatgcgctgatcgtggtcaccgggctatccggctccggcaaatcg
agcctcgcgttcgacacgatctatgccgaggggcagcggcgctatgtcgaaagcctcagc
gcctatgcgcggcagtttctggagatgatgcagaaacccgatgtcgaacatatcgacggg
ctgtcccccgcgatcagcatcgaacagaaaaccaccagtcgcaatccgcgctcgaccgtg
gcgacggtgactgagatctacgactatatgcggctgctgtgggcgcgggtgggggtgccg
tatagcccggcgaccggcctgccgatcgaagcgcagacggtgtccaacatggtcgaccgg
gtgatgactttgcccgaagggacgcggctctatctgctggccccggtggtgcgcgggcgc
aagggcgaataccgccgcgaactggccgaatggcagaaggcgggctttgcccgtgtgcgg
atcgatggcgagctgtacgaaatcgaacaggcccccgcgctcgacaagaaatacaagcac
gatatcgaagtggtggtggaccggctggcggtgcgccccggcatcgaaacccggctggcc
gacagtttcgaaaccgcgctcaagctggccgaagggctggcctatgtcgatctggccgat
ggcgtcgtgccgggtcgcgaggcggaagcgagcgcgggcggcgcgatgaagggggcgggc
atccccgccaaccgcatcgtgttcagcgaaaaattcgcctgcccggtcagcgggttcact
atcgaagagatcgaaccgcgcctgttcagcttcaacgcgccgcagggcgcctgcccgacg
tgcgacgggctgggggagaagctgctgttcgatccgcaactggtggtgcccaacgaacag
ctctcgctgaaaaaaggcgcggtggtgccctgggcgaagagcaatccgccgtcgccctat
tacatgcaggtgctgaacagcctggcgaaagcatacgatttcgacctgacgaccccgtgg
gaagatctggcgcaggatcagcgcgatatcatcttgcacggcacgggcgggctgccggtg
gcgctcacgtttaaggacgggcgcaaggaatacaccgtgcacaaaccgttcgaaggggtg
atcggcaacctcaaccgccggatgatgcaaaccgaaagcgcgtggatgcgcgaggaactg
agcaagtaccagaccgcgcaaccgtgcgaggcatgtggcggcaaacgcctgaatgaaaag
gcgctggcggtgaaagtgcccggccccaacggcccgaccgacatcgccacccccacgcag
atgagcgtgacgctggcgaaggactggttcctcgcgctgcccgatcacctgaccgatcag
cagaaccagatcgcccgcgccattctgaaagaaatcaacgaacggctgggcttcctcgac
aatgtcgggctggattacctcaacctcgaccggaccagcggcacgctgagcgggggggaa
agccagcgcatccgcttggccagccagatcggcagcgggctcagcggcgtgctctacgtg
ctcgacgaaccgagcatcggcctgcaccagcgcgataacgaccggctgctggaaacgctc
aagcggctgcgcgatctgggcaataccgtgatcgtggtggaacatgacgaggatgcgatc
cgcaccgccgaccatatcgtcgatctcggccccggcgccggggtgcacggcgggcagatc
gtggcgcaggggacgctgaaagatatcctcaaggcgaaggggtcgctcaccgccgattac
ctgaccgggcggcgcaagatcgcggtccccgaacagcgccgcaagggcaacggccaccac
ctgacggtgcacggcgcgcgggccaacaacctgcgcgatgtcaccgccgcgatcccgctg
ggcacgttcacctgcatcaccggggtttcgggcagcggcaaatcgagcttcaccatcgac
acgctctatgcctccgccgcgcggcagctcaacggcgcgcgcgtggtggccggggcgcac
gataaagtcaccggcctcgaattctgcgacaaagtgatcgaaatcgatcaaagccccata
ggccgcaccccgcgcagcaacccggcgacatacaccggcgccttcaccaatatccgcgac
tggttcgccggcctgccagaggcgcaggcgcgcgggtacaagccgggccggttcagcttc
aacgtgaagggcggccggtgcgaggcgtgccagggcgacggcctgatcaagatcgaaatg
cacttcctgcctgacgtgtacgtcacgtgcgaggaatgccacggcaaacgctataaccgc
gaaacgctggaggtgaagttcaaggggatgagcattgccgacgtgctcgacatgacgatc
gaggatgcggaagaattcttcaaggccgtgcccccgatccgcgacaagatgcacatgctc
aacgaagtcggcctcggctatgttaaagtggggcaacaggccaccaccctatcgggcgga
gaggcgcagcgggtgaaactggccaaggaactcgcccgccgcagcaccgggcaaacgctg
tatattctggacgagccgaccaccggcctgcacttcgaagatgtccgcaaactgctcgaa
gtgctccaccgtctggtggatcaggggaacagcgtagtggtgatcgaacacaatctggac
gtgatcaaaacggcagactggatcgtggacttagggccggacggcggcgtgcgcggcggc
gagatcgtggccgaagggacaccggaagatgtcgcggcgaacgagcggagctatacgggg
cagtatttgcgtgggatgttgtga
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