Tsuneonella flava: IDJ81_13185
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Entry
IDJ81_13185 CDS
T07616
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tfv
Tsuneonella flava
Pathway
tfv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IDJ81_13185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfv03021
]
IDJ81_13185
03400 DNA repair and recombination proteins [BR:
tfv03400
]
IDJ81_13185
Enzymes [BR:
tfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IDJ81_13185
Transcription machinery [BR:
tfv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IDJ81_13185
DNA repair and recombination proteins [BR:
tfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IDJ81_13185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Phage_tube_2
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
QSB44257
LinkDB
All DBs
Position
complement(2819970..2821022)
Genome browser
AA seq
350 aa
AA seq
DB search
MSVNTKNWQELKKPNTLDVKEGAKGRKVTFVAEPLERGFGLTLGNALRRVLLSSLQGAAI
TSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGAKRLQLSATGPGPVKAGDIA
VSGDIEVMNKDLVLCHLDDGATLNMELTADTGKGYVPAVSNRPADAPIGLIPVDSLYSPV
RQVSYKVENARVGQELDFDKLSLTIETDGTVTPEDALAYAARILQDQLTLFVHFEDGIPQ
PSSPMIGVAAQPEENDTNQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAEM
LRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaacaccaagaactggcaggaactcaagaaacccaataccctcgacgtcaaa
gaaggcgccaagggtcgtaaggtaacattcgttgccgaaccgcttgagcggggctttggc
ctgacgctcggcaatgcgctgcgccgcgtgctgctctccagcctgcaaggtgctgcgatc
acttcgatcaagatcgaaaatgttctgcacgagttctcgtcgctcgccggtgtgcgcgaa
gatgttaccgatatcgtgctgaacgtgaagcagatcgctctcaagatggaaggtgaaggc
gccaagcgtctgcagctttcggcaactggccccggcccggtgaaggcgggcgatattgcc
gtttcgggcgacatcgaagtgatgaacaaggatctggtgctgtgccatctcgacgatggt
gcgacgctgaacatggaactcactgccgataccggcaagggttatgtcccggcagtcagc
aaccgtccggccgatgcgccgattggtctgatcccggttgattcgctgtattcgccggtc
cgtcaggtcagctacaaagttgaaaacgcccgcgttgggcaggagctcgactttgacaag
cttagcctgacgatcgaaaccgatggcactgtgaccccggaagatgcgctggcctatgcc
gcccgcatcctgcaggatcagctcacgctgttcgtccacttcgaagatggcattccgcag
ccttccagcccgatgatcggcgttgccgctcagccggaagaaaacgacaccaaccagctc
aaccgttacctgctcaagaaggtggacgaactggaactgtcggtgcgttcggccaactgc
ctgaagaacgacaacatcatctacatcggcgacctggtccagaagaccgaagccgagatg
ctccgcacgccgaacttcggtcgcaagtcgctcaacgagatcaaggaagtcctgagctcg
atgggtctgcgcctcggcatggacatccctggctggccgccggaaaatatcgaagaaatg
gccaagaagctcgaacaggaactgctcggctaa
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