Thermococcus gammatolerans: TGAM_0385
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Entry
TGAM_0385 CDS
T00920
Symbol
appA
Name
(GenBank) ABC-type dipeptide/oligopeptide transport periplasmic component appA (appA)
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
tga
Thermococcus gammatolerans
Pathway
tga02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TGAM_0385 (appA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tga02000
]
TGAM_0385 (appA)
Transporters [BR:
tga02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
TGAM_0385 (appA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACS32887
UniProt:
C5A3S5
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All DBs
Position
complement(367192..368967)
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AA seq
591 aa
AA seq
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MNRKGLSLLLAVLFLSSIAAAPRVSASAGTELVLAVGKWKTLNPLTSSTVYSNVILDKVY
EPLIRWDKSGTKVTGALAEKWEFKKEGDNKVLTFHLRKGVKWHDGKEVTAEDVKFTIELF
KSNPAKFVNPDTLIINGLQEVKVVDKYTVQLVYNQSAAADKFLEMAFTTLYIVPKHIWED
KNIISDPTASLDKPEQLVGCGPFKVAEIKPGEYVKLQAFKDYYLGKPEVDTAIFKVLTDK
NQFAMMVANGELDAGYFYFFGKYLKEFENMVSGDPNVKIYRAASKSTHLLAFNFKKWPYN
DLKFRKAIAYALPVDKIVQKYYGTDGAKAGSMGFLGPFFGEYCKYMPKENLYPYDPDKAK
EILDELGFKDVNGDGYRETPDGKPFKIYLLTRAPGDSFFRDAIGDEIANYLKDVGIKVDV
DKAGDYWDKWGAGSWDMAIVGFVPHKPTDLIWFTSDNPGNRVGFSNKTYDETFEEFQRTG
DPALAHKLEEILANNVVFIALYHPIVATPYRVDRYKDWAPNPRFLTLGYWSLLGNPEKPT
TTTSSEKSSTTTSSSKTPSSSTSTTKKGEKGLCGPAALVLFAVLPLLKRRR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaaggggctttcgctactgctggcagttttgtttttaagtagcatcgctgca
gcgccaagagtcagtgcatcagcgggaacagaactcgtcctcgcggttggcaaatggaaa
acgctgaacccgctgacatcaagcacagtgtacagtaacgttatcctcgacaaggtgtac
gagccactcataaggtgggacaagagcggtactaaggtcacgggtgcgctcgcggagaag
tgggagttcaagaaagagggggataacaaagttctgacgttccacctaaggaagggcgtt
aagtggcacgacggcaaggaggtaaccgcagaggacgttaaattcaccatcgagctcttc
aagagcaaccccgcaaagttcgtgaacccggacacgctcatcatcaacggccttcaggaa
gtcaaggtagttgacaagtacacggttcagcttgtctacaaccagtccgcagccgccgac
aagttccttgagatggcctttacaacgctctacatagtcccgaagcacatatgggaggac
aagaacataatctccgatccgacagcctctctcgacaagccagagcagctggtaggttgt
ggcccgttcaaggtcgctgagatcaagcccggcgagtacgtcaagctccaggcctttaag
gactactacctcgggaagcctgaggtcgacaccgccatcttcaaggttctgaccgacaag
aaccagttcgccatgatggtcgccaacggcgagctcgacgcgggctacttctacttcttt
ggaaagtacctcaaagagttcgaaaacatggtttccggtgatccaaacgttaagatatac
cgcgcggcctcaaagtcaacccaccttctggcgtttaacttcaagaagtggccctacaac
gacctcaaattcagaaaggcaatagcctacgcactccccgttgacaagatagtccagaag
tactacggaactgacggagcaaaagcgggaagcatgggcttcctcggcccgttcttcggc
gagtactgcaagtacatgcccaaggagaatctgtacccctacgatccggacaaggccaag
gagatactcgatgagcttggcttcaaggacgttaacggcgacggctacagagaaacaccc
gacggaaagcccttcaagatatacctcctcacgagggcccccggagactcgttcttcagg
gacgcgataggcgatgaaatagcgaactacctcaaggacgtcggcatcaaggttgacgtt
gacaaggccggcgactactgggacaagtggggagcaggctcgtgggacatggcgatagtt
ggtttcgtcccgcacaagccgacagacctcatctggttcaccagcgacaacccgggcaac
agggtgggcttctccaacaagacctatgacgaaaccttcgaggagttccagaggaccggc
gatccggccctggcccacaagctcgaggagatactcgccaacaacgtcgtcttcatagcc
ctctaccacccgatagtcgcaacgccctacagggttgaccgctacaaggactgggcgcca
aacccgaggttcttaacgcttggctactggtcgctccttggaaacccggagaagccaacg
accacaacttcatcagaaaaatcctccacaacgacgtcatcctcaaagaccccctcatca
tcgacctcaaccaccaagaaaggtgagaaaggcctttgtggaccggcggcactggtgctc
tttgctgtgcttccgctgttgaagaggagaaggtga
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