Thermococcus gammatolerans: TGAM_0464
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Entry
TGAM_0464 CDS
T00920
Name
(GenBank) pre-mRNA splicing, snoRNA binding protein, NOP5/NOP56 related
KO
K14564
nucleolar protein 56
Organism
tga
Thermococcus gammatolerans
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tga03009
]
TGAM_0464
Ribosome biogenesis [BR:
tga03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
TGAM_0464
Prokaryotic type
TGAM_0464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Nop5_56-rel_N_Arc
TetR_C_34
Motif
Other DBs
NCBI-ProteinID:
ACS32966
UniProt:
C5A404
LinkDB
All DBs
Position
complement(453651..454919)
Genome browser
AA seq
422 aa
AA seq
DB search
MRVYIAENVRGVYAFDESGKLIASKPFSGKPETSLDRLLKGEPSDELSALLDELKGEGYE
EFIVEDTELSRKLKELGYNATAEFPNLAGEKLRSSPEEFLGENWFDEYYTVGVALTRLRI
QEQSGARDKMIIQAIEALDDIDKVINLLVSRLREWYGLHFPELDEILPKHPQYVTFVKEI
GPRENVSREKLEKLGFSEGKIKKILKAAEKSMGAPLGKFDSEIIRKLASEISDLYKLREQ
IEDYLETAMDEVAPNLKALVGAKLAARLMSLAGGLKELAMMPASTIQVLGAEKALFRHLR
TGAKPPKHGVIFQYPAINRSPWWQRGKIARALAGKLAIAARVDYFSGEYIGEELKKELEQ
RIKEIKEKYPNPPKRKAKPEKKKKKKFKGKEKKGKKHEKGRKEKKGKGKPDKKGKKKKKG
KR
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgagggtttacattgccgagaatgtcaggggcgtttacgccttcgacgagagcgggaag
ctcatcgcgagcaaacccttcagcggaaagccagagacaagcctcgacaggcttttgaag
ggagaaccgagcgacgagctgagtgccctcctcgacgagctgaaaggagaggggtacgaa
gagttcatcgtggaggacaccgagctgagcagaaagctcaaggagctcggctacaacgca
acagctgagttcccgaaccttgcgggagaaaagttgcgctcaagtccagaggagttcctc
ggcgagaactggtttgacgagtactacaccgttggcgttgcattaacgaggctccgcata
caggagcagagcggtgcgcgcgacaagatgattatacaggccatcgaggcgctcgatgac
atcgacaaggtcattaacctgctcgtttcgaggctgagggagtggtacggcctccacttc
cccgaactggacgaaatcctgcccaagcacccgcagtatgtgactttcgttaaggaaatt
ggcccgagggagaacgtgagcagggagaagcttgaaaagctcggcttctccgagggcaag
attaagaagatcctcaaagcggccgagaagtcgatgggagcaccgctcggtaagttcgac
agcgaaatcataaggaagctcgccagcgagataagtgacctctacaagctgagggagcag
attgaggactaccttgagacggcgatggacgaggtggctccaaacctgaaggctctggtc
ggtgcgaagcttgccgctcgcttgatgagcctcgctggaggccttaaggagctcgccatg
atgcccgcttcaacgatacaggttcttggagccgagaaggccctcttcaggcacctaagg
acgggcgccaagccgccaaagcacggcgtcatcttccagtaccctgcaataaaccgctcg
ccctggtggcagaggggtaagattgcgagggctttagctggaaagctggccatagcggct
cgcgttgactacttctctggtgaatacatcggtgaggagctgaagaaggagctcgagcag
agaatcaaggaaatcaaggagaagtacccgaacccgcccaagaggaaggccaagccggag
aagaagaaaaagaagaagttcaagggcaaggaaaagaagggcaagaagcacgaaaagggc
aggaaggagaagaagggtaaaggcaagcccgataagaagggtaagaagaaaaagaagggc
aagaggtga
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