Thermococcus gammatolerans: TGAM_0475
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Entry
TGAM_0475 CDS
T00920
Symbol
tfb-1
Name
(GenBank) Transcription initiation factor TFIIB (tfb)
KO
K03124
transcription initiation factor TFIIB
Organism
tga
Thermococcus gammatolerans
Pathway
tga03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TGAM_0475 (tfb-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tga03021
]
TGAM_0475 (tfb-1)
Transcription machinery [BR:
tga03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
TGAM_0475 (tfb-1)
Prokaryotic type
Archaeal type
TFB
TGAM_0475 (tfb-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_IS1595
Zn_Ribbon_Prim
RUBY_RBDX
Trm112p
Cyclin_N
Cyclin_C
A2L_zn_ribbon
FYDLN_acid
HTH_Tnp_ISL3
Ribosomal_S27e
HTH_AsnC-type
FtrD-like
UPF0253
ADK_lid
Zn_ribbon_LysW
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ACS32977
UniProt:
C5A415
LinkDB
All DBs
Position
463690..464601
Genome browser
AA seq
303 aa
AA seq
DB search
MADKRVCPVCGSTEFFFDRTRGELVCRVCGYVLEENVVDEGPEWRAFDPDQRARRARTGA
PMTLMIHDKGLSTDIDWRDKDIHGNQITGMYRSKLRRLRMWQRRMRINDAAERNLAFALS
ELDRMAAQMRLPRRVKEAAAALYRKAVMKKLIRGRSIEGMVSAALYAACRMEGIPRTLDE
IARVSKVTKKEIGRSYRFMARGLGLNLRPTSPIDYVDRFGDALGVSSKTKQRAKEILQEA
IKRGITSGKGPTGLAAAALYVASLLEGEKKTQREVAEVAHVTEVTVRNRYKELVEKLNIK
VPM
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ttggccgataagagggtgtgtccggtttgtggttcaacggagtttttctttgacagaacg
cggggagagctcgtctgccgggtctgcggttatgtgcttgaggagaacgtcgttgatgaa
gggccggagtggagggccttcgatcccgaccagagggcgaggcgcgcgagaactggtgcg
cctatgacacttatgatacacgataagggcctctcgaccgatatagactggcgcgacaag
gatattcatggcaatcaaataactggcatgtacaggagcaagctcagaaggctccgcatg
tggcagcggaggatgcgcataaacgacgccgccgagaggaacttggcgttcgcgctgagc
gagctcgacagaatggcggcccagatgaggctcccaaggcgcgtgaaggaagctgccgct
gccctttaccgcaaggccgttatgaagaagctcatccgcggacggtcaattgagggcatg
gtttcagctgctctgtacgcggcctgcaggatggagggcattcccagaacccttgatgag
atagccagggtttcgaaggtcacgaagaaggaaatcggaaggagttatcgctttatggcc
aggggtctgggcctgaacctccgcccgacgagcccgatcgattacgtcgataggtttggt
gatgccctcggtgtgagctccaagaccaagcagcgtgccaaggagatcctccaggaggca
ataaagaggggcattaccagtggtaagggcccgacggggctcgcggcggctgctctgtac
gttgcctctctcctcgagggagagaagaaaacccagcgtgaggttgcggaggttgcccac
gtcaccgaggtcaccgtgagaaatcgctataaggaactcgtcgagaagctcaacatcaag
gttccgatgtga
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