Thermococcus gammatolerans: TGAM_0797
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Entry
TGAM_0797 CDS
T00920
Symbol
rad3
Name
(GenBank) DNA repair helicase, ERCC2/XPD/rad3/TFIIH helicase beta subunit-like protein (rad3)
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tga
Thermococcus gammatolerans
Pathway
tga03022
Basal transcription factors
tga03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TGAM_0797 (rad3)
09124 Replication and repair
03420 Nucleotide excision repair
TGAM_0797 (rad3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tga03021
]
TGAM_0797 (rad3)
03036 Chromosome and associated proteins [BR:
tga03036
]
TGAM_0797 (rad3)
03400 DNA repair and recombination proteins [BR:
tga03400
]
TGAM_0797 (rad3)
Enzymes [BR:
tga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TGAM_0797 (rad3)
Transcription machinery [BR:
tga03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TGAM_0797 (rad3)
Chromosome and associated proteins [BR:
tga03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TGAM_0797 (rad3)
DNA repair and recombination proteins [BR:
tga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TGAM_0797 (rad3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
ResIII
DEAD
DDE_Tnp_2
AAA_30
AAA_19
Antimicrobial17
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACS33299
UniProt:
C5A4Y7
LinkDB
All DBs
Position
complement(749456..751378)
Genome browser
AA seq
640 aa
AA seq
DB search
MTELEYLPYEPRPHQLEFIELVRGAVERGENVIIEAPTGFGKTVSVLAGVLPVAKELGFK
VLYLARTHRQMDRVIEELKAINRKARVSGVEMRSRKELCLHNYLREYTSDAYTAMVVCKN
LRKSGKCQFYENEKKKKAEVEELTRFFLETPGHPAEILNYAETLEVCPYDVTRMIAYKAD
VIVASYLYALNPTIRENFMTYLDLDYSDLIVIFDEAHNLPDQAISALSDRMSIHTVNRAI
KEADEYREHEIANFLSIFGKGLEILYSEKLGSRDVEETPIAPELVFGHVMNVLGLDTRWL
VKTLNEMVAVGDSIREDRINKNKPPRSYIGRVGEFLLLWLSLIGRDDYLFLLTRERGLSL
ELVALDPSKALTFIRDVQSAVFMSGTLTPLEAFRDVMDIENARLKKFPRMVKRENAQVLV
AKDVSTRGEERSLDLYRRMTEYIVEAVKLIPKNVGVFTASYEVLQGLLSANLQVRLEETG
KAIFIERQGTSSAENDAMVASFKAHARGNGAVLLGVMGGRNSEGQDYSGDEMNGVILVGI
PYARPTPRVQAQIRYFERKFPGKGRYYGYYLPAHRKLVQAAGRVHRSAEEKGSIIILDYR
VLWRNVRKDFPDWMVETMKPVDLARMRLYLRRFWGTPTKG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgactgaactcgagtacctaccctacgaaccacgtccgcaccagttggagttcatcgaa
ctggttagaggggcagttgagaggggcgagaacgttatcatcgaggccccaactggcttc
ggaaagaccgtgagcgttctggctggagttcttccggtagccaaggagctgggcttcaag
gttctctacctggccagaacccacaggcagatggacagggttatagaggagctcaaggca
ataaaccggaaggcgcgggtctcgggggttgagatgagaagcaggaaagagctgtgcctc
cacaactacctgagggaatacaccagcgacgcttacaccgccatggtggtctgcaagaac
ctgcggaagagcgggaagtgccagttctacgagaacgagaagaagaaaaaggcggaagtc
gaggaactcacgcgcttcttcctcgaaactcccggacatccggccgagatcctgaactat
gccgagacccttgaggtctgcccctacgatgtcaccaggatgatagcatacaaggctgac
gtcatcgttgcgagctacctctacgccctcaaccccacgatacgggagaacttcatgacc
taccttgacctcgattactccgatttgatagtcatctttgacgaggcccacaacctgccg
gatcaggccatctcggctttgagcgacaggatgagcatccacaccgtgaacagagcaatc
aaagaggcagatgagtacagggagcacgagatagccaactttctcagcatattcgggaag
ggcctggagatcctgtactcggagaagctcggcagccgcgatgttgaggaaacccccata
gcgccggagctcgtgttcggccacgtcatgaacgtcctcgggctcgatacccggtggctc
gttaagaccctcaacgagatggtggcggtcggcgattcaataagggaggacaggataaac
aagaacaagccgccgaggagctacattggaagggttggggagttccttctcctgtggctc
tcgctgatcggacgggacgattacctcttcctcctcaccagggagagggggttgagcctt
gaactagttgctctggacccctcgaaggctttgacattcatccgcgacgtccagagcgcg
gttttcatgtccggcacactcacccctctggaggcatttcgcgacgtgatggacatcgag
aacgccaggctgaagaagttcccgcgcatggtgaagcgcgaaaacgcccaggttctcgtt
gccaaagacgtatccacgcgcggtgaggaacgctccctcgacctctaccggaggatgacg
gagtacatagttgaagccgtcaagctgatccccaagaacgtcggcgtcttcacggcctct
tacgaggttctccagggcctcctgtctgcgaaccttcaggtcaggcttgaggagaccgga
aaggccatcttcatcgagaggcaggggacgagctctgctgagaacgacgcgatggtggcg
agctttaaggcccacgcgaggggcaacggtgcagttttgctcggcgttatgggagggaga
aacagcgagggacaggactactcgggcgacgagatgaacggtgtgatcctcgttgggatt
ccatacgcgaggcccacaccgcgcgtccaggcccagataaggtacttcgagcgcaagttc
cctggaaagggccgctactacggctattacttgccggcccacaggaagctcgttcaggcc
gccggaagggttcaccgctcggcggaggagaagggctcgataataatcctcgactaccgc
gtcctctggaggaacgttagaaaggacttccccgactggatggtagaaactatgaaaccc
gttgatctcgcgaggatgcggctgtatctgaggaggttctggggaaccccgactaagggt
tag
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