Thermococcus gammatolerans: TGAM_0870
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Entry
TGAM_0870 CDS
T00920
Name
(GenBank) ski2-type helicase, putative
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
tga
Thermococcus gammatolerans
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tga03400
]
TGAM_0870
Enzymes [BR:
tga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TGAM_0870
DNA repair and recombination proteins [BR:
tga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
TGAM_0870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
HHH_5
Helicase_C
ResIII
HHH_2
HHH
Cdd1
DEXQc_Suv3
DNA_pol_lambd_f
DUF4332
Motif
Other DBs
NCBI-ProteinID:
ACS33372
UniProt:
C5A560
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All DBs
Position
complement(812210..814372)
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AA seq
720 aa
AA seq
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MKVDELPVDERLKAVLKERGIEELYPPQAEALKSGALEGRNLVLAIPTASGKTLVSEIVM
VNKLIQEGGKAVYLVPLKALAEEKYREFKEWEKLGLKVAATTGDYDSTDDWLGRYDIIVA
TAEKFDSLLRHGARWINDVKLVVADEVHLIGSYDRGATLEMILTHMLGRAQILALSATVG
NAEELAEWLDASLVVSDWRPVQLRRGVFHLGTLIWEDGKVESYPENWYSLVVDAVKRGKG
ALVFVNTRRSAEKEALALSKLVSSHLTKPEKRALESLASQLEDNPTSEKLKRALRGGVAF
HHAGLSRVERTLIEDAFREGLIKVITATPTLSAGVNLPSFRVIIRDTKRYAGFGWTDIPV
LEIQQMMGRAGRPRYDKYGEAIIVARTDEPGKLMERYIRGKPEKLFSMLANEQAFRSQVL
ALITNFGIRSFPELVRFLERTFYAHQRKDLSSLEYKAKEVVYFLIENEFIDLDLEDRFIP
LPFGKRTSQLYIDPLTAKKFKDAFPAIERNPNPFGIFQLIASTPDMATLTARRREMEDYL
DLAYELEDKLYASIPYYEDSRFQGFLGQVKTAKVLLDWINEVPEARIYETYSIDPGDLYR
LLELADWLMYSLIELYKLFEPKEEILNYLRDLHLRLRHGVREELLELVRLPNIGRKRARA
LYNAGFRSVEAIANAKPAELLAVEGIGAKILDGIYRHLGIEKRVTEEKPKRKGTLEDFLR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgatgaacttcccgttgacgagaggcttaaggcagtcctcaaggagaggggc
atagaggaactctacccaccgcaggcggaagcattgaagagcggtgccttagagggcaga
aacctcgttctggcaatcccaacggcgagcggaaaaactctcgtgagcgagatagttatg
gtgaacaagctcatccaagaggggggcaaggcagtctacctcgtccccctcaaggccctg
gcggaggagaaataccgagagttcaaggagtgggagaagctgggtctgaaggtcgcggca
accacaggagactacgactcaaccgacgactggcttgggcggtacgacataatagtcgcc
accgccgagaagttcgactcccttctcaggcacggcgcgaggtggattaacgacgttaag
ctcgtggttgccgacgaggttcacctaataggctcctacgacaggggagcgacgctcgag
atgattctgacgcacatgctcggcagggcgcagatattggccttgagcgccaccgtcggc
aacgcggaggagctggctgagtggctcgacgcttccctcgtcgtcagcgattggagaccc
gttcagctgaggcgaggagttttccacctcggaacgctaatctgggaggatgggaaggtc
gagagctatcccgagaactggtactccctcgtggtcgatgctgtgaagaggggcaagggt
gccttagttttcgtcaacacgaggcgctcggctgagaaagaggctttggcgctctcgaag
ctggtctcaagtcatcttaccaagcctgaaaagcgggccttagaaagtctcgccagtcag
cttgaggacaaccccacgagcgagaagttaaagcgggccctcaggggcggcgttgccttc
catcatgcagggctgagcagggttgagagaaccctgatagaggacgcctttcgcgagggc
ctaattaaggtaatcacagcgacgccgaccctctcggctggggtgaatttaccttcattc
agagtaataatccgcgacaccaagcgctacgcgggcttcggctggaccgacattcccgtt
ctggaaatccagcagatgatgggtcgcgctggaaggccgaggtacgacaaatacggcgag
gccataatagtggcgagaacagacgagcccggcaagctaatggagcgctacatccgcggg
aagcccgagaagctcttctcgatgctcgccaacgagcaggccttcagaagtcaggttctg
gctttaatcaccaactttggaatcaggagcttccccgagctcgtacgcttccttgagagg
actttctatgcccaccagaggaaggatttgagctcgcttgagtacaaggcgaaagaggtg
gtctacttcctaatagagaacgagttcattgacctggaccttgaggacaggtttattccg
ttgccctttggaaagagaacctcccagctctacatagaccctctcacggccaagaagttc
aaagacgcctttcctgcaatcgaacggaacccaaaccccttcgggatctttcagctcata
gcctcaacccccgacatggcgactttaacggccagaaggcgcgagatggaggactacctt
gacctggcctatgagctcgaggacaagctctacgcgagcataccctactacgaagactcg
cgcttccagggcttcctcggtcaggtgaagactgccaaggttctcctcgactggattaac
gaggttcccgaggcgaggatttacgagacctactcgatagaccccggcgacctctacagg
cttcttgagcttgccgactggctcatgtactcgctcatcgagctctacaagctcttcgag
ccgaaggaggaaatcctgaactacctccgcgacctgcaccttcgcctgaggcacggggtt
agagaagagctcctcgaactcgtcaggttgccgaacatcggaaggaagagggcgagggct
ctctacaacgcggggtttagaagcgttgaggcgatagcgaacgcaaaacctgcggagctt
ttggcggtcgagggaataggtgccaaaatcctcgacggaatctaccgccaccttggaatc
gagaagagggtaacggaagaaaagccaaagcgaaaggggactctggaggacttcctcaga
tag
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