Thermococcus gammatolerans: TGAM_1046
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Entry
TGAM_1046 CDS
T00920
Symbol
pcnA
Name
(GenBank) DNA polymerase sliding clamp (Proliferating cell nuclear antigen-like protein) (PCNA) (pcnA)
KO
K04802
proliferating cell nuclear antigen
Organism
tga
Thermococcus gammatolerans
Pathway
tga03030
DNA replication
tga03410
Base excision repair
tga03420
Nucleotide excision repair
tga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TGAM_1046 (pcnA)
03410 Base excision repair
TGAM_1046 (pcnA)
03420 Nucleotide excision repair
TGAM_1046 (pcnA)
03430 Mismatch repair
TGAM_1046 (pcnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tga03032
]
TGAM_1046 (pcnA)
03400 DNA repair and recombination proteins [BR:
tga03400
]
TGAM_1046 (pcnA)
DNA replication proteins [BR:
tga03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
TGAM_1046 (pcnA)
DNA repair and recombination proteins [BR:
tga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
TGAM_1046 (pcnA)
MMR (mismatch excision repair)
Other MMR factors
TGAM_1046 (pcnA)
TLS (translesion DNA synthesis) factors
Other TLS factors
TGAM_1046 (pcnA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_N
Rad1
PCNA_C
Rad9
Hus1
Motif
Other DBs
NCBI-ProteinID:
ACS33548
UniProt:
C5A5N6
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(1003252..1004001)
Genome browser
AA seq
249 aa
AA seq
DB search
MPFEIVFDGAKEFADLIATASNLIDEAAFKITEEGVSMRAMDPSRVVLIDLNLPESIFSK
YEVEEPETIGINMDHFKKILKRGKSKDTLILRKGDENFLEITFEGTAKRTFRLPLIDVEE
LELELPELPFTAKVVLLGEVLKEAIKDASLVSDSLKFIAKEDEFTMKAEGETNEVEIKLT
LEDEGLLDLEVEEETRSAYGISYLADMVKGIGKADEVTLRFGTEMPLQMDYFIRDEGKLT
FLLAPRVEE
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttgagatcgtttttgacggagcgaaggagtttgcggacctaatagcaaccgcc
agcaacctcattgatgaggcggcctttaagatcaccgaggaaggggtcagcatgcgcgct
atggacccaagcagagtcgttctcatagacctcaacctcccggagagtatattctccaag
tacgaagtagaggagcccgaaacgatagggatcaacatggaccacttcaagaagatcctc
aaaaggggcaagagcaaggacacgctcatactcaggaagggagacgagaacttcctcgag
ataaccttcgaaggaacggccaagagaaccttccgccttccgctcattgacgtcgaggag
cttgagctcgaacttcctgagcttccattcaccgcaaaagtcgtcctcctcggtgaggtt
ctgaaggaggccatcaaggacgcttccctcgtcagcgactcactgaagttcatagccaaa
gaggatgagttcacaatgaaggccgaaggggagaccaacgaggtagagatcaagctcacg
ctggaggatgagggcctgctcgacctcgaggtcgaggaggaaacgaggagcgcctacgga
ataagctatctggcggacatggttaagggcatagggaaggccgatgaggtcacgctgagg
ttcgggacagagatgcccctccagatggactacttcataagggacgagggcaagctgacg
ttccttctcgctccccgcgttgaggagtga
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integrated database retrieval system
