Thermococcus gammatolerans: TGAM_1198
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Entry
TGAM_1198 CDS
T00920
Symbol
tfb-2
Name
(GenBank) Transcription initiation factor TFIIB (tfb)
KO
K03124
transcription initiation factor TFIIB
Organism
tga
Thermococcus gammatolerans
Pathway
tga03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TGAM_1198 (tfb-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tga03021
]
TGAM_1198 (tfb-2)
Transcription machinery [BR:
tga03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
TGAM_1198 (tfb-2)
Prokaryotic type
Archaeal type
TFB
TGAM_1198 (tfb-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
HTH_AsnC-type
RB_B
RUBY_RBDX
Zn_ribbon_tTFIIB
UPF0253
FYDLN_acid
Sigma70_r4
Ribosomal_S27e
FtrD-like
Zn_ribbon_RRN7
Zn_ribbon_IS1595
Zn_Ribbon_Prim
Lar_restr_allev
Zn_ribbon_LysW
ADK_lid
Motif
Other DBs
NCBI-ProteinID:
ACS33700
UniProt:
C5A638
LinkDB
All DBs
Position
1132712..1133614
Genome browser
AA seq
300 aa
AA seq
DB search
MSKKRVCPICGSTEFIYDPSRGEVVCKVCGYVIEENVVDMGPEWRAFDASQREKRARAGA
PESILLHDKGLSTDIGIDRSLTGLMREKMYRLRKWQSRLRVSDAAERNLAFALSELDRLA
SNLRLPRHVEEEAARLYREAVRKGLIRGRSIESVIAACVYAACRLLKIPRTLDEIAEVSR
VDKKEIGRSFRFIARHLNLTPKKLFVKPTDYVSKFADELGLSEKVRRRAIELLEEAYEKG
LTSGKSPAGLVAAALYIAGIMEGERRTQREVAEVARVTEVTVRNRYKELIEKLNLKVPIS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagaagagggtctgccccatctgtggttccacagagttcatttacgaccccagc
aggggagaggtcgtttgtaaagtctgcggctacgtcatcgaggaaaacgttgtcgatatg
gggcccgaatggagggcctttgacgcgagccagagggagaagagggcccgtgcaggcgcc
cccgagagtatactcctccatgataaaggcctgtcaaccgacataggcatagaccgctcc
ctcaccggtctgatgagggagaagatgtaccgtctgagaaagtggcagtcacgcctaaga
gtcagcgatgccgccgagcgtaacctcgccttcgccttaagcgagcttgacagactcgcc
agcaatctccgccttccaaggcacgttgaagaggaggctgcaagactctacagagaagcg
gtcaggaaaggcctcataaggggtcgctccattgaaagcgtcatagcggcgtgtgtttac
gccgcctgcaggctgctcaagatcccgaggaccctcgacgagatagcagaggtttcccgc
gtcgataagaaggagatcggcaggagcttccgcttcatagcgagacacctcaaccttacc
cccaagaagctcttcgtcaagccgaccgactacgtgagcaagttcgctgacgagctgggc
ctgagtgaaaaggtcagacggagggcaatagaactgctggaggaggcctacgaaaagggc
ctcacgagcggaaagagtccagccggcctcgttgcagcggcactctacatagccggcata
atggaaggggagagaagaacccagcgcgaggtggcggaagtcgcgcgcgttacagaggta
acggtaagaaacaggtacaaagagctaatagagaagctcaacctcaaggttccgataagc
tga
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