Thermococcus gammatolerans: TGAM_1630
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Entry
TGAM_1630 CDS
T00920
Name
(GenBank) ATP-dependent DNA helicase, putative, UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tga
Thermococcus gammatolerans
Pathway
tga03420
Nucleotide excision repair
tga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TGAM_1630
03430 Mismatch repair
TGAM_1630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tga03400
]
TGAM_1630
Enzymes [BR:
tga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TGAM_1630
DNA repair and recombination proteins [BR:
tga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TGAM_1630
MMR (mismatch excision repair)
Other MMR factors
TGAM_1630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
AAA_18
DO-GTPase2
nSTAND3
AAA_24
COE1_DBD
RB_A
Motif
Other DBs
NCBI-ProteinID:
ACS34132
UniProt:
C5A7C0
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All DBs
Position
1538600..1540255
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AA seq
551 aa
AA seq
DB search
MNAQITILGPPGTGKTSALINLYKYFIGDASTDVTSFVQRYGLNKLITRRDYTSDEVLFL
TFTTSAVRVLKERGIYNAYTLHSYITRVLMRNKLLTPAGFMREPFIAAMMEMNYGYDFRD
RFSSHPSNVAEIRYNYYFNVYYDKTSKEILEIVKQQEKDAVYQRIRDYVAWKEEKGIFDY
VSVLRYFLTTTPATLAPEKEGSEPRVMIIDEAQDFSPLQWAVVKRLRSIGLLDYVVAAGD
PNQSIYSFQGADPSEFENFMASGTVVVLKRSYRLPKQVYNKAEMLTRWLRTHFEYEPREE
LGKAITEYLKKSNLLKMNRTTGEKVIQILESVMDEDKTVFVLTRTNKQARELEKYIIEAG
YRVSRIKNDDSLYDLLEEVIAFEEKRSIGMRLFFAVTSLNEEGIRLRSLFKTPIEAMMKV
EECLTEGEHPNDEDNKAGKCSDDVLSLARFIENHYLDVLDPEEKRVLAGLRKKRNGRAIY
VDTMHAAKGEEADVVIVIDFVNRKIEKEIQRDENALKEEVRVLYVAMTRARERLYVLTSK
SKRSVLGYVRF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcccagataaccattctggggcctccagggacgggaaagacctctgctctcatc
aatctctacaaatactttatcggagacgcttccacggatgttacaagcttcgtgcaacga
tacggtctcaataagctcatcacgagaagggattacacgagcgatgaggttctctttctt
acctttacaacttccgcggtcagggttctgaaagaaagaggaatttacaacgcgtacact
ctgcacagttacatcacaagggttcttatgcggaataaactcctcacaccagcaggattc
atgagagagccgtttattgccgcgatgatggaaatgaactatggctatgacttcagggat
cggttcagttcacacccgtcaaacgttgccgagataaggtacaactactatttcaacgtc
tattatgataaaaccagcaaggaaattctcgaaattgtaaaacaacaggagaaagacgcc
gtgtaccagagaataagggattacgtggcatggaaggaggagaagggcatttttgactat
gtgtcagttctcaggtacttccttacaaccactcccgccacactcgctccagagaaagag
ggcagtgagcccagagtcatgataatagacgaagcccaggacttcagtccccttcaatgg
gcagttgtgaagagattgaggagcatcggtctccttgactatgtagtcgcggctggagac
ccgaatcagtcaatatattcattccagggggctgatccttccgagtttgagaatttcatg
gcatctggtacagttgttgtattgaagagaagttatagactgcccaagcaagtgtataac
aaggcagagatgcttacgcgatggctcagaacccacttcgagtatgagccacgtgaagaa
cttggtaaggccattacagagtacctgaagaagtccaatctcctcaagatgaatagaacg
actggtgagaaagtgattcagattcttgagagcgttatggatgaagataagaccgtgttc
gttcttacacgaacaaacaagcaagcgagagagctcgaaaagtacatcattgaggcggga
tacagagtctcaaggataaagaatgacgacagcctttatgacctccttgaggaagtcatc
gccttcgaggagaaaaggagcattgggatgaggctgttcttcgctgtaacttctttgaat
gaggaaggaattcggcttcggtccctgttcaaaacgcccatagaagccatgatgaaggtt
gaagaatgcctcactgaaggagagcaccccaatgatgaagacaataaagcaggcaagtgt
tctgatgacgttctatcccttgcgaggttcattgagaaccattaccttgatgttcttgat
ccggaagagaagcgtgttttggctgggctcagaaagaagaggaatggaagggcaatctac
gtggacacgatgcacgccgcaaagggcgaggaggctgatgttgtcattgtcattgatttc
gtgaatcgcaagattgagaaggagattcagagggatgagaacgctctgaaggaggaggtg
agggttctttacgttgcgatgactcgtgcacgagagaggctttatgttctcacaagcaag
tcaaagaggtctgtgttggggtacgtgaggttttga
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