Thermococcus gammatolerans: TGAM_1925
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Entry
TGAM_1925 CDS
T00920
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A' (rpoA1)
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
tga
Thermococcus gammatolerans
Pathway
tga03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TGAM_1925 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tga03021
]
TGAM_1925 (rpoA1)
Enzymes [BR:
tga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TGAM_1925 (rpoA1)
Transcription machinery [BR:
tga03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TGAM_1925 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
EAD1
TraB_PrgY_gumN
Motif
Other DBs
NCBI-ProteinID:
ACS34427
UniProt:
C5A208
LinkDB
All DBs
Position
complement(1847022..1849739)
Genome browser
AA seq
905 aa
AA seq
DB search
MQSMKKVIGSIEFGILSPQEIRKMSAAEITVPDTYDDDGYPIEGGLMDKRLGVIDPGLRC
ETCGARAGECPGHFGHIELARPVVHVGFAKTIQRVLESTCRECGRIKLTDEEIEEYMKKF
EVIGDRKKDKDRLIKEIHKKAKERMVCPHCGAPQFPIKFERPTIYYELRRDEEGNEYKHR
MMPSEIRDRLERIPDKDLPLLGLHPEKSRPEWMILTVLPVPPVTMRPSITLESGIRAEDD
LTHKLVDIIRINNRLKSNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGIPPAKHKSGRP
LKTLAQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMISINEVGVPLAIAMELTVPEKVT
EFNFEKLKQRVLNGPEKYPGANYVIDPEGRRIRLMENNLETIAERLDIGWTVERHLEDGD
IVLFNRQPSLHRMSIMAHRVRVMPYKTFRLNLPVCPPYNADFDGDEMNLHVPQTEEAQAE
AKILMEVQNHIISPRYGGPLIAGIQDHISGGYLLTREGAYFTRSEVEQMLTFAGVDVDEL
PKPDKVENGVELWSGKTIFSLLLPDDLTLWYRNKLCDEPERCEAIEKLIEEKLVPDPEEV
RKIAYDGFVYIQNGKLLSGAIDKKAYGREDGKLLDIIVREYGVERARQFLDQVTKLTIWV
ITHKGFTTAIDDEDLPQEALDRIKEIIREAEERVNKLIEAYKRGELEPLPGKTLEETLES
KIMAVLAEARDNAGKVAERYLGMNNHAVIMAKTGARGKILNITQMAAMLGQQSIRGKRLY
RGYRGRVLTHFKPGDLGARARGFVVNSYKSGLTPQEYFFHAMGGREGLVDTAVRTAQSGY
MQRRLINALQDLKVDYDGTVRDPTGIIVQFRYGEDGVDPMRSWQGRTLDVERIIVRNLLK
SRGGR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgatgaaaaaggtcatcgggagtatcgagttcggaatactctcaccccaggaa
atcagaaagatgagcgctgccgaaatcacagttcctgacacctacgacgatgacggttac
cctattgaaggaggcctcatggacaagaggctcggtgtcattgaccccggtctcaggtgt
gagacctgtggagccagagccggggagtgcccgggacactttggccacatagagctcgcg
agacccgttgtccacgttggttttgccaagactattcagcgggtcctcgaaagtacctgc
cgcgagtgcgggaggataaagctcaccgacgaggagatagaggagtacatgaagaagttc
gaggtgatcggcgaccgcaagaaggacaaagaccggctcatcaaggagatccacaagaag
gccaaggagagaatggtctgcccgcactgtggggcaccgcagttcccgatcaagttcgag
aggccgacgatatactatgagctcaggcgcgacgaggagggcaacgagtacaaacacaga
atgatgcccagcgagataagggacaggcttgagaggatccctgacaaagaccttcctctc
ctcggactccaccccgagaagtcccgtcccgagtggatgatcttaaccgttctcccggtt
ccacccgttacaatgaggccatcgattacactcgagagcggcattcgtgcggaggacgac
ctcactcacaagctcgttgacataatccgcatcaacaaccgcctcaagtccaacatcgag
gccggtgcgccgcagctcatcatcgaagacctctgggacctccttcagtaccacgtgacg
acttacatcaacaacgagacctcgggaattccgccggccaagcacaagagcggaagaccc
ctcaaaaccctcgcccagaggcttaagggtaaagaaggtcgcttccgtggaaacctcagc
ggtaagcgcgttaacttctctgctcgtacggtcatcagccccgatcctatgataagcata
aacgaggtcggcgttcccctcgcgatagcaatggaacttaccgtacccgagaaggtcacg
gagtttaactttgaaaagctcaaacagcgcgttttgaacggtcctgagaagtatccaggg
gcgaactacgtgattgatccagagggaaggagaatccgcctcatggagaacaacctcgag
acaatagccgagaggcttgacataggctggaccgttgagagacaccttgaggacggtgac
atagtcctcttcaacagacagccgtcccttcacaggatgagcataatggcccaccgcgtt
agagtaatgccatacaagaccttccgcctcaacctgccggtgtgcccgccgtacaacgcg
gacttcgacggtgacgagatgaacctccacgtgccccagactgaggaagctcaggctgag
gcgaagatcctcatggaggttcagaaccacatcatctcaccccgttacggcggccccctc
atcgctggaattcaggaccacatctccggcggctacctcctcacccgtgaaggagcttac
ttcacccgctcagaggtcgagcagatgctaacctttgcgggcgttgatgtggacgagctt
ccgaaaccggataaggtcgagaacggcgtcgagctctggagcgggaagacgatattctcc
ctcctcctgcctgacgacctgacactctggtaccgcaacaagctctgcgacgaaccggag
cgctgcgaggccattgaaaagctcatcgaggagaagctcgttcccgacccagaagaggta
agaaagattgcctatgatggcttcgtttacattcagaacggaaagctcctcagcggtgcg
atagacaagaaggcttacggcagggaggatggaaagctccttgatattatcgtgagggag
tacggcgttgagagggcgaggcagttcctcgatcaggtcaccaagctgacgatatgggtt
ataacccacaagggcttcacgacggccatagacgacgaagaccttcctcaggaagctttg
gacagaatcaaggagatcatccgggaggctgaggagagagtcaacaagctcatcgaggcc
tacaagcgcggcgagcttgagccactccccggtaagacacttgaggagacccttgagagc
aagataatggccgtcttagctgaagcacgtgacaacgccggtaaggtcgccgagaggtac
ctcggtatgaacaaccacgccgttataatggccaagaccggggctaggggtaagatactc
aacataacccagatggcagcgatgctcggccagcagtcgattcgtggtaagaggctctac
cgcggttaccgtggaagggttctgacgcacttcaagccgggtgatctgggagcgagggca
aggggcttcgtcgtgaactcctacaagagtggcttgactccacaggagtacttcttccac
gcgatgggcggtagagagggactcgtcgatactgccgtcaggactgcacagagcggttac
atgcagagaaggttgatcaacgcgctccaggatctcaaagtggactacgacggaacggtt
agagacccgaccggaatcatcgtccagttccgctatggggaggacggcgttgatccaatg
aggagctggcagggcaggacgctcgatgtggagaggataatagttagaaacctgctcaaa
tcgaggggcgggaggtga
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