Thermococcus gammatolerans: TGAM_1972
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Entry
TGAM_1972 CDS
T00920
Symbol
truB
Name
(GenBank) Centromere binding protein CBF5/pseudouridine synthase truB-like protein (truB)
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tga
Thermococcus gammatolerans
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tga03016
]
TGAM_1972 (truB)
Enzymes [BR:
tga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TGAM_1972 (truB)
Transfer RNA biogenesis [BR:
tga03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TGAM_1972 (truB)
Prokaryotic type
TGAM_1972 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
UPF0113
SIR2_2
Motif
Other DBs
NCBI-ProteinID:
ACS34474
UniProt:
C5A255
LinkDB
All DBs
Position
complement(1888055..1889059)
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AA seq
334 aa
AA seq
DB search
MARDEVRRILPADIKREVLIKDEKAETNPKWGFPPERRPMEMHMQFGIINLDKPPGPTSH
EVVAWIKKLFNLSKAGHGGTLDPKVSGVLPVALERATRVVQALLPAGKEYVALMHLHGDI
PEDKILAVMKEFQGEIIQRPPLRSAVKRRLRTRKVYYIEVLEIEGRDVLFRVGVEAGTYI
RSLIHHIGLALGVGAHMAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGIEEYFRKAI
QPMEKAVEHLPKVWIRDSAVAAVTHGADLAVPGIVKLHKGIKKGDLVAIMTLKDELVALG
KAMMTSGEMLQRSKGIAVDVDKVFMPRDWYPRMW
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggatgaagtgaggagaatccttcccgctgacataaagagagaggttctgatt
aaggacgagaaggccgagacgaacccgaagtggggctttccgcccgagaggaggccgatg
gagatgcacatgcagttcggcataattaacctcgacaaaccacccgggccaactagccat
gaggttgtcgcgtggattaagaagctcttcaacctgagcaaggccggtcacggcggaacc
ctcgatcccaaggtcagcggcgttctaccggttgcccttgagagggccacgagggtggtt
caggcacttttgccggcgggaaaggagtacgtagctttaatgcaccttcacggcgacatt
cccgaggacaaaatcctcgccgttatgaaggagttccagggcgagataatccagaggccg
ccgctgaggagcgctgtgaaaaggcgcttgaggacgaggaaggtctattacatagaggtg
ctcgagatagagggcagggacgtgctctttcgcgttggtgtcgaggcgggaacgtacata
cgttcgcttatccaccacataggcctggctttgggcgttggagcgcacatggcagagctt
cgtcgtaccagaagcggtcccttcaaggaggacgagacgctggtgacgcttcacgatttg
gttgactactatcacttctggaaggaggacggcatcgaggagtacttcaggaaggcgata
cagccgatggaaaaggcggttgaacatctgcccaaggtgtggataagggactctgccgtt
gcggcggtgacgcacggcgctgacctggccgttcccggaatagtcaagctccacaagggt
ataaagaagggtgacctcgttgcgataatgaccctcaaggacgagctggtggcacttgga
aaggccatgatgacgagcggtgagatgctccagcggagcaagggcatagcggttgacgtt
gacaaggtcttcatgccgagggactggtatccgagaatgtggtga
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