Thermococcus gammatolerans: TGAM_2056
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Entry
TGAM_2056 CDS
T00920
Symbol
endA
Name
(GenBank) tRNA-splicing endonuclease (endA)
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
tga
Thermococcus gammatolerans
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tga03016
]
TGAM_2056 (endA)
Enzymes [BR:
tga01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
TGAM_2056 (endA)
Transfer RNA biogenesis [BR:
tga03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
TGAM_2056 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
ACS34558
UniProt:
C5A2D9
LinkDB
All DBs
Position
1955742..1956248
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AA seq
168 aa
AA seq
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MIVFYLSGDRVFSTDQNAINGLYNKRHFGKLVEGKLFLSLLEATYLVERGKIEVREGKRK
LTVEELMNLGRERDELFDAKYLVYKDLRDRGYTVKSGLKFGSHFRVYRRGMDEHSQWLVW
VLPENSRLSPNDITARVRVAHGVRKNMIMAIVDEDADVTYYKVEWVRF
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcttttacctgagcggggacagggtcttttcaaccgaccagaacgcgataaac
ggcctttacaacaagcgccacttcggaaagctggtggagggcaagctcttcctctcgttg
ctcgaagccacatacctcgtcgagaggggcaagatagaggtcagggagggaaagagaaaa
ctaaccgtcgaggagctcatgaacctcggaagagagagggacgagctgttcgacgctaag
tacctcgtctacaaggatttgcgcgacaggggctacaccgtcaagtcaggtttaaagttc
ggctcgcacttccgcgtttacaggcgcggaatggacgagcactcccagtggctcgtgtgg
gttctcccagagaactcccgcctgagcccgaacgacataacggcgagggttagggttgcc
catggcgtcaggaagaacatgattatggcgatagttgatgaggacgccgatgttacctac
tacaaggtcgagtgggtgaggttttag
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