Torulaspora globosa: HG536_0A03120
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Entry
HG536_0A03120 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
tgb
Torulaspora globosa
Pathway
tgb03013
Nucleocytoplasmic transport
tgb03015
mRNA surveillance pathway
tgb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HG536_0A03120
09122 Translation
03013 Nucleocytoplasmic transport
HG536_0A03120
03015 mRNA surveillance pathway
HG536_0A03120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0A03120
03041 Spliceosome [BR:
tgb03041
]
HG536_0A03120
Enzymes [BR:
tgb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HG536_0A03120
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
HG536_0A03120
Spliceosome [BR:
tgb03041
]
Complex C
Other components
EJC/TREX
HG536_0A03120
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
HG536_0A03120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
RE_ScaI
Motif
Other DBs
NCBI-GeneID:
59323592
NCBI-ProteinID:
XP_037137170
UniProt:
A0A7G3ZAF9
LinkDB
All DBs
Position
1:577147..578478
Genome browser
AA seq
443 aa
AA seq
DB search
MSHEGEEDLLEYSDNEQEIQVDAKEAADAEVANEGNTEAAETNNADNEKKGSYVGIHSTG
FKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQ
LDPVPGEVSVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPIAKDAELLKNKDT
APHIVVATPGRLKALVRDKMIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQV
MMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDD
LEFNQVIIFVKSTSRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVST
DVFGRGIDIERINLAINYDLTTEADQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLTKIQ
ERFDVKIAEFPEEGIDPSTYLNN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatgaaggggaagaggatttattggaatactctgacaatgagcaagagattcag
gtagatgccaaagaggctgctgacgccgaagttgctaacgaggggaatactgaagctgct
gaaaccaataatgctgataacgagaagaagggttcctatgtgggtatccactccacaggt
ttcaaggatttcttgttgaagcctgagctgtcaagggctattattgactgtggttttgag
catccatcagaagtgcagcagcacacaattcctcagtccattcacggaactgacgtctta
tgccaggctaagtccggtctaggtaagactgctgtgttcgttttatcgaccttacaacag
ttggatccagttcctggcgaagtctcggtggtcgtcatctgtaacgcaagagaattggcg
tatcaaattcgtaacgagtacttgagattctccaagtatatgccagatgtcaagaccgcc
gtcttttatggtggtactccgatcgcaaaggacgctgaactattgaagaataaagacaca
gctcctcatatcgtggtggctactcctggtcgtttgaaagccttggttagagacaagatg
atcgatttatcccacgtcaagaattttgtcatcgatgagtgtgacaaggttttggaagag
ctagatatgagaagggatgtccaagaaatttttagggctacccctagagacaagcaagtg
atgatgttttctgccaccctttcgcaggaaattagaccaatttgcagacgtttcttacag
aacccattggagatctttgtcgacgatgaggctaaactaacactacatggtttgcagcag
tattatatcaagctggaggagcgtgagaagaaccgtaaattagctcaactattagacgat
ctggagttcaaccaggttatcatctttgtgaagtcgacttcgagagcaaatgaactaacc
aagctgttgaacgcttctaacttccctgccatcactgttcatggacatatgaaacaagag
gaacgtattgcgcgttacaaagcttttaaagactttgagaaacgtatatgtgtctccacc
gatgtctttggtagaggtattgatattgagcgtatcaatttggctatcaactatgattta
acaactgaggcagatcaatatttgcaccgtgtcggtagagctggtagatttggtaccaag
ggtttggctatctcatttgtgtcttcgaaggaagacgaagaagtcttgactaaaattcag
gaacgtttcgatgttaagattgccgaattcccagaggaaggtatcgacccttcgacctat
ttgaacaattag
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