Torulaspora globosa: HG536_0A05370
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Entry
HG536_0A05370 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
tgb
Torulaspora globosa
Pathway
tgb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HG536_0A05370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0A05370
03041 Spliceosome [BR:
tgb03041
]
HG536_0A05370
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
HG536_0A05370
Spliceosome [BR:
tgb03041
]
Complex B
Other components
Prp19-related factors
HG536_0A05370
Complex C
HG536_0A05370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
Mad3_BUB1_I
TPR_8
NRDE-2
TPR_15
TPR_2
Motif
Other DBs
NCBI-GeneID:
59323819
NCBI-ProteinID:
XP_037137397
UniProt:
A0A7G3ZB36
LinkDB
All DBs
Position
1:971391..973904
Genome browser
AA seq
837 aa
AA seq
DB search
MNRLNCTQMLSQHFKIPVWCQMEWLDQYIVREDDLAYEYELQRTPQSVVTWGRYLEDWKS
QPRSERPLKHVIWLYERFCAEFNDSIDVWKEYIRWLAGKCGEEVHYRFVIDLFLRCLRNF
SKDCDELCLMFLEFAIEQADLEAIRIAFDMSLERVPRDSHGRVWDKMLRFIDERLAPLTE
EDESVYENEEEELSVLIYKSLFGPSTAAEDESKVDLWSSSIVRRYLEVCPRDKLPDALGR
LARTGDYESLFASFHKALNSNDGCLPDKTLPRETNLQYLRALDCLNKGPNYEAFATEMAR
VFPEMEIKMTTMLAKFYVKNGGHEKVVQLLEDSLAKVATVQDFHVLYETYLNYEKSYIQT
VLQELQTKTEPVCEKKWKGQLDNHMDRLQNLVETYELRLNDLKIRQNPNLVANWSERAAL
VRTNVDKCSIYSQAILTIDPFKVNVPGSFGKLWCDYANLYWKARDYESAREVYDRGLRVP
YPYIEDLENIWSSWVENEMEEAGLEVALKLLETALRVPENPELLLAEFNEGDRKVPAQGV
IFSSLKLWQLYLDFTESLCAQTSEAVEKMVNLYEQAIALKVATPKMFVDYAHFLQDRGEK
LASFQVYERAIGLFPPETQFQFWNLYLAESTAEENLLAKEHIREIFEQALEILIPSGIDC
KAIFILYSDFEERCGLSNRCVEILLEGCRKTADLEDKVTLWQICLLKVKELLGNEESRRF
YEECIQSLPNSKVIKFAIEFADTEATLGEIERARGIMKCAAQLLPPGRNALLWESWDEFE
VRYGDRESYKEMLKLKRRLEKEMRIETEIESQIEGNIAFVAASKPNAVNPEEIELDL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggttaaattgcactcagatgctatctcaacacttcaagatccccgtttggtgc
caaatggagtggcttgatcagtatattgtccgggaagacgacctcgcttacgagtatgag
ctgcagaggactccgcaaagtgtggttacctggggtcggtatttagaagactggaagtcg
cagcccaggtcagagcgacctttgaagcacgttatttggctttacgagagattttgtgca
gaattcaatgatagcattgatgtttggaaagaatatattcgatggttagcaggaaaatgc
ggagaggaggttcattacaggtttgtaatagaccttttcttgagatgcttgcgtaacttt
agcaaggattgtgatgaattgtgtttgatgtttttggagttcgccatcgagcaagcggat
ttagaagccattaggatagcctttgatatgtcgctcgagagagtaccgagagactcgcac
gggcgcgtttgggataaaatgctgcgattcatagacgagaggttggcgccgttgactgaa
gaagacgagtccgtgtatgaaaacgaggaggaggagcttagcgttcttatttataagtca
ctttttggtccttctaccgcagcggaggatgaaagcaaggtcgatctttggtcgtcaagc
attgtacgaagatacttggaggtatgtccgcgcgataagctgccggacgctcttggtagg
ttggctcgtactggggattatgagagtctatttgcgtcattccacaaagcccttaacagc
aatgacggttgtctgcccgataagactctgcccagagagactaatctccaatatcttagg
gcgctggattgcctgaataagggtcctaactacgaagcgttcgcaactgagatggcgaga
gtcttccctgaaatggaaatcaagatgacgacaatgctagcaaagttctatgtcaaaaac
ggtgggcatgaaaaagtagttcagttattggaagactctttagcaaaagttgcgactgtt
caggactttcatgtgctttatgaaacgtaccttaactatgagaaatcgtatattcaaact
gttttacaggaattgcagacaaaaacagaaccagtctgcgaaaagaagtggaaaggccag
ttagacaaccatatggatcgtctgcaaaatctcgtggagacctatgagctcagattaaac
gaccttaagatcagacagaacccaaatctggtggccaactggtccgagagagccgctttg
gttcgaacaaacgttgataagtgcagtatctactcacaggcaattttgacaatagatccc
ttcaaggtgaacgtccccggctccttcggtaagctgtggtgcgactacgctaatctatat
tggaaggcaagggactatgagagcgctcgagaagtttacgatcgaggcctacgggtacca
tatccatacatcgaggacctcgagaatatatggagctcttgggtggagaatgaaatggaa
gaagccggcctggaagttgcattgaaactgctcgaaaccgctttacgagtaccggagaac
ccagaattgctgcttgcagaattcaacgagggtgatagaaaggttcctgctcaaggagta
attttcagttcgttaaaactttggcagctctacctcgacttcacagaatcgttatgtgct
caaacatcggaggccgttgaaaaaatggtcaacctgtatgagcaggcaatagctttgaaa
gtggcaacaccaaagatgtttgtcgattacgctcattttctccaagatagaggcgagaaa
ctagcaagttttcaagtatatgagcgtgctattgggcttttcccaccagaaacgcagttt
caattttggaatctttatctggctgagagcacagctgaggagaatttacttgcaaaagag
catatccgtgaaatttttgaacaagctttggaaattttgataccaagcgggatagactgt
aaggccattttcattttgtacagtgactttgaagagcgatgtggcttgtctaataggtgt
gtcgaaatcctactggaaggctgcaggaagactgcagatttagaggataaagtaacatta
tggcaaatttgcttactgaaagtcaaagaacttctaggaaatgaagagtcccgtagattt
tacgaggaatgcattcaatctctgcctaactcgaaggtaattaaatttgccatcgaattt
gcagatacagaagcgacgctgggagaaatagagagggcaagaggaattatgaagtgcgct
gcgcaactgttacctccagggagaaatgcactactatgggaaagctgggacgaatttgaa
gtacgctatggggacagagaaagttataaagagatgcttaagctcaaaaggcggctggaa
aaggaaatgcggatagaaactgaaatcgaaagccaaatagagggcaatatcgcatttgtt
gctgcctcaaaacctaatgccgttaatccagaagaaatagagttggatttatga
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