Torulaspora globosa: HG536_0A09470
Help
Entry
HG536_0A09470 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tgb
Torulaspora globosa
Pathway
tgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG536_0A09470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0A09470
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HG536_0A09470
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
HG536_0A09470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_HEAT_N
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
ARM_Cnot1
CNOT1_HEAT
NOT1_connector
TFIIA
CUB_M02D8_5_3rd
Borrelia_P83
Tri-helical_Ada2b_C
DDHD
Motif
Other DBs
NCBI-GeneID:
59324227
NCBI-ProteinID:
XP_037137805
UniProt:
A0A7G3ZC94
LinkDB
All DBs
Position
1:1677716..1684036
Genome browser
AA seq
2106 aa
AA seq
DB search
MQAARTESSSERKQEKEAVQIVISQISLLLTALTEDKYQEISKKIGFLLDKSPFAVYIKY
WRKLLVLCSRDIKQEHFLTPQKNLFHRLLLELFEQLPEKDSETREVLNQEIFNNIAFLDQ
CGLTVEHITALFRERTDILEQLNPQITLDKLRSLKEIRMNNSKYLQNFLLQSSPDTLGSN
LTDLLQSLEGESLNDMVALMLSEILSPGSQRIQANLHESWFTPNGIADATARGQSVNKSF
DRLAGNAINWNRVFNLMSTKYFLTTIIKPTIASLSCLLACLEKGPLIDQFFECDWDLNFK
LELAFILHKWATEQGCFDILAVEGTKKVTDQIPNTKNSLLFLTSIASLDLELFLLRDELA
NNSMLPYYQECFFEDFSKVPELLAFALITNMKHFHLLVERRTIINEIMVTLLVQIAERSL
DYLGPVVRALPENARIVEAARIMISKENLPIAELVKILAAEDKLDNLIEELSFGEALKII
PCARKAGWLGFENFMQKKLNSSNASLVVDMLETQAKMSEVATPFDASQRLDLSGLHLLIT
MLTKCSLNDSDLERFESVQFSLIIARPRLINFGFGHDQAILSNGDEAPISPDVEKEMQNY
LQKMYSGELAIKDIIDILRKLRDSQNSRDQDVFACMTHAVIAESSFFRDYPLDALATTSV
LFGSMILFQLLRGFVLDVAFRIILDFAKEGPESKMFKFAVQAIYAFKFRLADYPNYCRDL
LEKVPGLQSQPQVYQSVVDAALAGEKLQASGQESNRSAAETIPLKYFTLEEPPAHVLQEN
PPKEITEKVLFVVNNITMDNFETKISDLKSVLSPNYFSWFSNYLVNQRAKTEPNYHKLYS
RILLSLNSELLHEFMVAVTCKQLHSFLSTKDTQLIDKNHLKNMSMWLGCITLAVNRPIRH
RTIAFRELLLDAYHEKRLNIVVPFVAKVLQNAADSRIFRPPNPWTLGIVKILLELNNKAN
WKLSLTFEVEVLMKSLGLDPKDVSPSNLINVNNIADELAGNLNNLTVEQRNSEQQRQMAT
MQQYQQQLLLSQQRQRRVISGGVLPPSEHAPVGLENVTAGDSNFSNINGSTIFATHPDLT
RVFQMAMAKSVREVLLPAVDKASSIAVVTTMKIVLKDFATEADEMKLQAAAVGMVRHLSQ
SLARTTAIEPLKDVIRSTTQSLAPNLMNMQNSFVEELNTAMNDNLGIALAIIEKAAMDKA
TQDVSEQLLQPMAIRRYHKERRAGQPFLTQNTNPYSLTLPEPLGLKSSGVTPQQFSIYEK
QGEYASTFESTPGVNVPIQSQATRQQILLQQQQMRTQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQHPPQPVQAKLLPGQNQIPIQNPQAMGIQSELEQNHRVLVHLMDGLVVQIKENA
DKKSMKDLGEQNSIKAIIFQILTFIARSSQKDQLALKVSQAVVNSLFATSESPLCREVLS
MLLEKLCSLSIVARKDVVWWLVYALDSRKFNVSVIRSLLDVKLIDANELDNVLVTTMENK
MENSVNFAMELIRGTVMSTSPILMRMDFIHTLAYLGTLEDASVKSFMTEYETRVILPVEV
GTKVSNREKYFLVFTEWVKLLQRVECNDIATFVFIKQMKQKGVISNTDNLIGFITAALEL
SVLSFKESDPTGEVFTAIDALAKIITKLLVVQDFEDVSRADYLNIIFSVIALVFSKDHEQ
ENATFNERPHFRLLSNLLYEWETLRGHKFVKVRNVQARKELLDFDAHFYNIFSTYLQSVQ
PIAFPGFSFAWVTLISHRMFLPTMLRLPNKGGWKNLMLLLIDLLKFLDKYTDKNEVSNAI
SVVYKGALRVFLGISNDMPEFLIENHLELMNNLPPTYLQLKNVILSAIPKKMMLPNPYSS
SLSLDEVNECKQPPKVFYDPISESSTLRKPVDNYLRIPSNSLLKSILAATQRTEYDMKNG
LGYTYLSVDVKTVRAIVLHVGIEAGQECQTVSFNAVFNTKSAYYTLLFNLVQEGSVELKY
HIIQAMVEQLRYPNVHTSWFIFALRKMFVSEQWDDQLVEVQELILRNLLERIVVNRPHTW
GISVMFTQLIKSPEVNLVELEFVKNIPEIATLLEPLYRYISPSTQTDNRNEEKLSTATAN
AVDAKV
NT seq
6321 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcagcaagaacagaatcatctagcgaaaggaagcaggaaaaagaggccgttcag
atcgtcatttcacagattagtttattgcttaccgcgctcacggaggacaaataccaggaa
atcagtaagaagatcggttttctactcgataagtctccatttgccgtttatatcaagtac
tggaggaagttgctagtgctttgctcacgagatattaagcaggaacattttttaacacca
cagaaaaacctattccacaggttactcttggagcttttcgaacagctgcctgagaaggat
tcagaaacaagagaagttcttaatcaggaaatcttcaacaacattgcatttttagaccag
tgtggactgacagtagagcatataaccgcacttttcagagaaagaactgacattttagag
cagctaaaccctcagatcacattagataagctccgctctttgaaagaaatcaggatgaat
aacagcaaatatctgcagaattttcttttgcagtcttcgccggacactttggggtctaat
ttaacagacttacttcagtctttggagggcgagagcttaaacgacatggtagcgctcatg
ttatcagagatattgtcgcctggttctcaaagaatacaagcaaacctccacgagagttgg
ttcacaccaaatgggatagctgatgcaaccgcgcgaggtcagtctgttaataaatctttt
gataggttagcggggaatgctataaactggaatcgggtcttcaatctaatgtccaccaag
tattttctaacaaccataataaagcccacaatagcttccctcagctgcttacttgcatgc
ctagaaaagggccctcttatagatcaattcttcgaatgtgattgggatttgaatttcaag
ctagaactggcattcattttacacaagtgggccacggagcagggttgtttcgatatttta
gccgtggaaggtactaagaaagtaacggatcagatacctaacacgaaaaactcattatta
ttcctaacatccattgcttcgctagatttggaactattcctgctgagggatgaattagct
aataactctatgcttccctattaccaggaatgtttcttcgaggactttagcaaagttcct
gagttgttagccttcgccttaattactaacatgaagcatttccatttgttggtcgaaaga
agaacaataattaacgaaataatggtgactttgctggtacagatcgctgaaagatccctt
gactacctaggccccgtcgtgagagctctaccagagaacgcgcggatcgtggaagctgcg
agaattatgataagcaaagagaatttaccgattgcagagcttgtgaaaattttggccgca
gaggataagctggataacttgatagaggagttgtcctttggagaagctctgaaaatcata
ccttgtgccagaaaagcgggatggctaggttttgaaaattttatgcagaaaaagctcaat
agcagcaatgcgtcactagtagtggacatgctagaaacgcaagccaagatgagcgaagta
gcaacaccgtttgatgcttcccaaagattagatttgtctggtcttcatctactcatcaca
atgctcactaaatgttctttgaacgatagtgatctagagcgctttgaatcagtacaattc
tctttgattatcgctcggccgcgcctgatcaactttggtttcggtcacgatcaagcaatt
ctaagcaatggagatgaagccccaatatctcctgatgtagagaaggagatgcagaattat
ttgcaaaaaatgtacagtggcgaattggcaattaaagatattattgatatcttgaggaag
ctaagagacagtcagaacagcagggaccaagatgtctttgcctgtatgactcatgctgtc
attgcagaatcgagcttttttagggattatcctcttgatgccctcgctaccacatctgtt
ctttttggttcaatgatcttatttcagctgctgcgggggtttgtgttggatgttgcattt
agaattatcttggattttgcgaaagagggccctgaatctaagatgtttaaattcgctgtt
caagcaatttatgcattcaagtttaggctggcagattatccaaattattgcagggatcta
ctcgaaaaagttcctggtttacagtctcagcctcaagtttatcaatctgtcgtagatgca
gcgttggctggagaaaagttacaggccagtggtcaagaaagtaacagaagtgcagcagaa
acaattccattgaagtatttcactttagaagagccacctgcgcatgtgctgcaagaaaac
cctcctaaggaaatcacggaaaaggttttattcgttgtcaataatatcacgatggataat
ttcgaaacaaagatatcggacttgaaatcggttttatctccaaactatttctcctggttt
tcaaactatctcgtgaaccaaagggcgaaaacagaaccaaactaccataagctctatagc
aggatcctgttatctttgaattccgaactactgcatgagttcatggtagctgtaacatgc
aaacagctgcattctttcctttcaactaaggatacacaacttatagataagaatcatttg
aaaaacatgtcaatgtggctcggctgtatcaccctggcggtaaataggcccatcagacat
cgaactattgctttcagagagctgcttttggacgcctatcatgaaaagcgattgaacatc
gttgtaccctttgttgcaaaagtactgcagaatgcagcggactctaggatattcagaccg
ccaaacccgtggaccttgggtatcgtgaaaatacttctcgagctaaataacaaggcgaat
tggaaacttagcctaacttttgaggttgaagtgctgatgaaatcactcggcctagatcct
aaagacgtttctccatccaatctaataaacgtgaataatattgcagatgaattagctggt
aacttgaataatctgactgttgaacaaaggaattctgagcagcaaaggcaaatggctact
atgcagcaataccaacagcagttgttactttcccagcaaaggcaacgaagagttatttct
ggtggagtacttcctccttcggaacacgcgcctgtgggacttgaaaacgtcactgctggc
gatagcaatttcagcaatatcaatggttcaacgatcttcgctactcacccagatctgacg
cgagtttttcaaatggctatggcgaagtctgttcgtgaagtgcttttgccagctgtagat
aaagcgtcaagcatcgctgttgtgacgacgatgaagatagtcctcaaggattttgcaacg
gaagcggatgaaatgaaacttcaggctgctgcggtaggaatggttagacatctatctcaa
agtctagcccgcacgactgcaatcgagccattaaaggatgtcattagatcaacaactcaa
tctttggcccctaatctgatgaacatgcagaattcttttgtggaggaattgaataccgct
atgaacgataacctgggtattgccttggccataatcgagaaggcggcaatggacaaagct
actcaagatgtaagtgaacagttactgcagccaatggcaattcgtcgctaccataaggag
agaagagcaggccaaccgtttttgacccaaaatacgaatccatattcgctgacgttacca
gaaccgttaggtctcaaaagctcaggcgttactccccagcaattcagtatctatgaaaag
caaggagaatatgcatcgacttttgaaagcacaccaggcgtcaatgtccccattcaaagc
caagcgactcgccaacagattttacttcagcagcaacagatgcgtactcaacagcaacaa
caacagcagcagcaacaacagcagcaacaacagcagcaacaacaacagcagcaacagcag
caacagcaacaacagcaacaacatcctccccagccggttcaagctaaactcctaccaggt
cagaaccaaattccaattcaaaatccacaggccatgggaatccaaagcgagctagagcag
aaccatcgagttctagttcatttgatggacggtttagttgtacagatcaaggagaatgcc
gacaagaaaagtatgaaggatctgggagaacagaactcaattaaggccatcatattccag
attcttaccttcatagctcgaagttctcaaaaggatcaattggcgttgaaagtatcgcaa
gcggttgtcaacagtttatttgcaactagtgaaagcccattgtgcagagaggttttatcc
atgctattggagaaactatgctcgctttcgatcgtagcgagaaaggacgttgtgtggtgg
ctggtttatgctctggatagccgaaaatttaacgtttctgttattcgatcgttgcttgac
gtcaaattgattgatgccaatgaattggataatgttcttgtgactacaatggagaacaaa
atggaaaattctgtgaattttgcgatggagttgatacgaggtaccgtcatgtcgacatct
ccaattttgatgcgaatggattttatccacactctggcatacttaggtacgcttgaggac
gctagcgtcaagtcatttatgacagagtatgaaactcgagtgatattaccggttgaagta
ggaaccaaggtttcgaacagggaaaagtactttttggttttcactgagtgggtaaagctt
ctacagagagttgaatgcaatgatatcgctacatttgttttcattaaacaaatgaaacaa
aaaggtgtaatttccaacacggataatctgatcggctttatcactgctgcattagagctc
tctgttttgtcattcaaggaaagtgaccccactggcgaggtgtttactgccattgacgct
ttagcaaagataatcactaaactacttgtggtgcaagatttcgaggatgtgtctcgagcg
gactatttgaatatcatcttctccgtcatcgcgcttgtgttctccaaagaccacgagcaa
gaaaatgcgactttcaacgaaagaccgcatttcagattactttcgaaccttttgtatgaa
tgggaaactctcagaggccataaattcgtcaaggtccgcaacgttcaagcacgtaaggaa
ttgctggactttgatgcccatttttacaacattttctcaacatacttacaatcagttcaa
ccaattgccttccccggcttctcttttgcatgggtcacgctcatatcgcacagaatgttc
ttaccaacaatgttaaggctgccaaacaagggtggttggaaaaacctgatgctactgcta
atcgaccttctgaagttcctggataaatacacggacaagaatgaagtgtctaatgccatt
tccgtggtctacaaaggcgctcttcgcgtcttcctaggaatttccaatgacatgcctgaa
tttctaatcgaaaaccacttggagttgatgaataatcttcctcccacttacctgcagctg
aagaatgtgatcctatcggcaatacccaaaaagatgatgctaccaaatccgtatagctca
tcattatccttggatgaggttaacgaatgtaagcagcctcctaaggtcttttacgatcca
atctccgaatccagtacattgaggaagcctgtggataactacctccgtattccttcaaac
tccctgctgaaaagcattctggctgctactcagagaacagaatacgatatgaagaatggg
ctcggctatacgtacctctctgttgacgtgaaaacggttcgcgccattgtgcttcatgtc
ggcatcgaagcaggccaggaatgtcaaacggtatcattcaatgctgttttcaacaccaag
tctgcttactatacgcttctattcaatttagtacaggaaggatctgtcgagctcaagtat
cacatcatacaggcaatggtcgagcaactcagataccccaatgttcacacgtcctggttc
atttttgcattgagaaagatgtttgtttccgagcagtgggatgatcagctagtcgaggtc
caagagctcatcctgcgcaatctgctcgaaagaatcgtcgtcaacagacctcatacctgg
ggtatatctgtaatgtttacgcagctgatcaagagtcccgaagtgaacctagttgaattg
gaattcgtgaagaatatacccgagatagccacccttttggaacctctttacagatacatt
tcgcccagcacgcagacagacaaccggaacgaggagaaattatctactgctactgcaaat
gcggtggatgctaaagtatga
DBGET
integrated database retrieval system