Torulaspora globosa: HG536_0C04620
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Entry
HG536_0C04620 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tgb
Torulaspora globosa
Pathway
tgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG536_0C04620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0C04620
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HG536_0C04620
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
HG536_0C04620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
59325429
NCBI-ProteinID:
XP_037138968
UniProt:
A0A7G3ZFK7
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Position
3:860010..862442
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AA seq
810 aa
AA seq
DB search
MAHRKLQQEIDRVFKKINEGLEIFDTYYERHENCTNNPSQKDKLESDLKREVKKLQRLRE
QIKSWQSSPEIKNKDALLDYRRSVEIAMEKYKAVEKASKEKAYSNISLKKSDMLDPQERE
RRCVSEFLSGMIDELERQYDGLQVEIDRLILLNKKKKTASSANEEQKEQLKSLQGRYRWH
QQQMELALRLLANEELNPDSVKEVQDDISYFVDSNRDPDFVEDETIYDALNLQANEAIAH
EVAQYFASQQAEDNADDDELRDSSKLSKKEQRKMEREAKKAAKIAAKAKTDEEAVVREPE
AQDVDRPKSPEQQVEESMKSIQSPATGASIAESPKSPTATAPKEASSSPSFSNDNRESHP
GYTHIHQSLNGVTTTSTLKPATVPARPAGELKWAVAASQGVEKDRKAPVATPATSFTGLT
NGNTQNISSSTSASSAMSSRMASAANTPRLVTPSLEPSNSGSLEGSSPFVNINSVSASTA
AAVLAAGAAAVHMNNKAINKHNNPSYQLAEVLNSRNNSSVLNSSLDLSQRAKKEVKTAPE
LIIDDYEAEFTDDEIDDEPVPEVLVPEERAKRIKAKELLTRKLLEDYELLLVPSGIQEFI
MGVQLFENGLEPLDGKLGGFRRSRDACSIPRSDEVPIGVNPPAPLDAFRSTQQWDITRCT
LRSVVYNKEISEEQRYEAILDKFRSLEMFTLFYNYYFAVTPLEQTIASLILGERNWKVSK
SGTVWFLRQGEPKFTNDMCEVADYKIFKLDDWTVVDKPNYKLDYCTLGSSPEQLKYHQSN
LQGGEGEFNKLSHGQQLLQQLKQGKVATSA
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatcgtaagttacaacaggagattgacagggtattcaagaagatcaacgaaggt
ctggagatcttcgacacctattatgagaggcatgaaaactgtacgaataacccatctcaa
aaggataagctcgaatcggacctcaagagagaggtgaagaaattgcagaggctgcgagaa
cagatcaaatcgtggcaaagctcacctgagattaagaataaggatgccttactggattat
aggaggtctgtggagattgccatggagaaatacaaagccgtggagaaagcttcgaaggaa
aaggcgtattcgaacatcagtctcaagaagtcggacatgttggatccacaggaacgagaa
cgaagatgtgtctctgagttcctttccggtatgattgacgaattagaaaggcaatatgac
gggcttcaggttgagatcgatcggctgatattgctgaataagaagaaaaagacagcatca
tctgctaatgaagagcagaaggagcagttgaaaagcttacaggggagatataggtggcat
caacaacagatggaattggcactgcgacttttggccaacgaagagctgaatccggatagc
gtgaaagaagtacaggacgacataagctatttcgtcgattctaatcgggacccagatttt
gtggaagacgagacgatatacgatgcactcaacttgcaagctaatgaagcgattgctcac
gaggtcgctcaatactttgcgtctcagcaggctgaagataatgccgatgacgatgaattg
agggattcatctaaactatcgaagaaagagcagagaaagatggaaagagaggcgaaaaaa
gcagccaagatagctgcaaaggcgaagacggacgaggaggcggttgtcagggagcctgag
gctcaggacgttgacaggccaaaatcaccggaacagcaagtggaagaaagcatgaagagc
atacaatcgccagccacaggggcaagtatcgcagaaagcccgaaatctccaaccgcgact
gctccaaaagaagcatcctcgtcaccgtcctttagcaatgacaacagagaatcacatcct
ggatatacgcatattcatcaaagtttaaatggtgttactacgacaagtaccttgaagcct
gcgaccgtcccagcaagaccagcgggagagctaaaatgggcagtagccgcttcccaaggt
gttgaaaaggaccggaaagcacccgttgctacgccagctacaagctttacgggtctaaca
aatggcaacacgcaaaacatatcatctagcacatccgcttcttccgctatgagtagcaga
atggcgagcgctgcaaacacgccaaggctagttactccatccttggaaccatctaattca
ggctcattggaaggttcttcgccgtttgttaacatcaactcggtatcggccagtacggca
gcggctgtccttgctgcgggtgcggccgccgtgcatatgaacaacaaggctattaataag
cataataatccatcctatcaattggcagaggtcctcaatagcagaaacaacagttccgta
ttaaattcttcattagacttgagccagagagcaaagaaagaggttaaaaccgccccggaa
ctgattatagatgactatgaggctgaatttaccgatgacgaaatagacgacgaaccagta
ccagaagttctggtacctgaagagcgtgcaaaacgtataaaggcgaaggagctgctgacg
aggaaattacttgaggattatgagctgctactagtaccgagtggaattcaagagttcata
atgggtgttcagcttttcgaaaacggtctggagccgcttgatggtaagttgggaggtttc
agacgctctcgcgacgcctgcagtataccgagatcggatgaggttccaatcggtgtgaac
ccgccagcgcctttggatgctttcagatcaacgcagcagtgggatattactcgctgtaca
ctaaggtccgtcgtttataacaaagagataagcgaggagcaaaggtacgaagcgatttta
gacaagtttaggtctttggaaatgtttaccctattctacaattattatttcgccgtaaca
ccactagaacagacgatagcctcattgattctcggcgaaagaaattggaaagtttccaag
agtggcacggtatggtttttaaggcagggagaaccaaagttcactaacgacatgtgcgaa
gttgcagattacaaaatatttaagctggatgactggaccgtagtagataagccgaattac
aaactggattactgtactttggggagcagtcccgaacaattaaagtaccaccagtcaaat
ttgcaaggcggtgaaggagaatttaataaattgagccacggtcagcagttactccagcag
ttgaagcaaggtaaagtcgcgacatccgcctga
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