Torulaspora globosa: HG536_0D00290
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Entry
HG536_0D00290 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K07573
exosome complex component CSL4
Organism
tgb
Torulaspora globosa
Pathway
tgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG536_0D00290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0D00290
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
HG536_0D00290
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
HG536_0D00290
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
CSL4_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
59325675
NCBI-ProteinID:
XP_037139182
UniProt:
A0A7G3ZG71
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Position
4:48877..49746
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AA seq
289 aa
AA seq
DB search
MSSVSPDELPVEVPEKVFPGQLICPEFGVKQQAKNDIVYKFVSGQGTQFQEYQYEGSKIK
AIVSTLVGNVAFKAVQSPRSDNDEDSSADKRLLEIDTRNRTVVTIEVSVLQKNSKFEDRN
VNDDFANNLPKEGDIVLTRVTKISQQRANVEILAVENQPVPIDSGVGSNGSGIVAAQGGS
GAATFSISQASSDLGETFRGLIRSQDVRATERDTVKIIDCFKPGDIVRAQVLSLGDGTNY
YLSTARNDLGVVFARAFNGCGGLMYAVDWQTMAAPSTGTTEKRKCARPF
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgtttcaccagatgaacttcccgtagaagttccagaaaaggtttttcccgga
cagctcatatgcccagaattcggcgtgaagcagcaagcgaagaacgacatagtatacaag
tttgtgagcggtcaagggacacagtttcaagaataccagtacgagggaagcaagataaag
gctatagtctcaaccctggttggaaatgttgcattcaaagctgttcaatcgccacgtagc
gataatgacgaggactcatcggccgacaagcgactgctagagattgatactcgcaatagg
acagttgtcactatcgaagtctcagtgttgcagaagaatagtaaatttgaagacaggaat
gtgaacgatgatttcgcaaacaaccttccgaaggagggagatattgtattaacgagagtg
acaaaaatatcccaacagagagctaatgtagagatcttggcagtcgaaaaccagcctgtc
cctatagatagcggcgtcggaagcaatggatcaggaatagtagcagcacaaggaggttcg
ggagcagctacgttttcgataagtcaagcttcctctgatctcggagagaccttcagagga
cttattcgttctcaagatgtgagggccacagaaagggatacagtcaaaataatagattgt
ttcaagcctggcgacatagtgcgggcgcaagtcttgtcgttgggtgatggtactaattat
tacttatccactgcaaggaacgatcttggcgtagtttttgcgagagcattcaacggctgt
ggcggattgatgtatgcggtggactggcagacaatggccgctccaagtactggtacgacg
gagaagcgtaaatgtgcgagacctttctga
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