KEGG   Torulaspora globosa: HG536_0D00290
Entry
HG536_0D00290     CDS       T06981                                 
Name
(RefSeq) uncharacterized protein
  KO
K07573  exosome complex component CSL4
Organism
tgb  Torulaspora globosa
Pathway
tgb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tgb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HG536_0D00290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgb03019]
    HG536_0D00290
Messenger RNA biogenesis [BR:tgb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     HG536_0D00290
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     HG536_0D00290
SSDB
Motif
Pfam: EXOSC1 CSL4_N RRP4_S1
Other DBs
NCBI-GeneID: 59325675
NCBI-ProteinID: XP_037139182
UniProt: A0A7G3ZG71
LinkDB
Position
4:48877..49746
AA seq 289 aa
MSSVSPDELPVEVPEKVFPGQLICPEFGVKQQAKNDIVYKFVSGQGTQFQEYQYEGSKIK
AIVSTLVGNVAFKAVQSPRSDNDEDSSADKRLLEIDTRNRTVVTIEVSVLQKNSKFEDRN
VNDDFANNLPKEGDIVLTRVTKISQQRANVEILAVENQPVPIDSGVGSNGSGIVAAQGGS
GAATFSISQASSDLGETFRGLIRSQDVRATERDTVKIIDCFKPGDIVRAQVLSLGDGTNY
YLSTARNDLGVVFARAFNGCGGLMYAVDWQTMAAPSTGTTEKRKCARPF
NT seq 870 nt   +upstreamnt  +downstreamnt
atgagctctgtttcaccagatgaacttcccgtagaagttccagaaaaggtttttcccgga
cagctcatatgcccagaattcggcgtgaagcagcaagcgaagaacgacatagtatacaag
tttgtgagcggtcaagggacacagtttcaagaataccagtacgagggaagcaagataaag
gctatagtctcaaccctggttggaaatgttgcattcaaagctgttcaatcgccacgtagc
gataatgacgaggactcatcggccgacaagcgactgctagagattgatactcgcaatagg
acagttgtcactatcgaagtctcagtgttgcagaagaatagtaaatttgaagacaggaat
gtgaacgatgatttcgcaaacaaccttccgaaggagggagatattgtattaacgagagtg
acaaaaatatcccaacagagagctaatgtagagatcttggcagtcgaaaaccagcctgtc
cctatagatagcggcgtcggaagcaatggatcaggaatagtagcagcacaaggaggttcg
ggagcagctacgttttcgataagtcaagcttcctctgatctcggagagaccttcagagga
cttattcgttctcaagatgtgagggccacagaaagggatacagtcaaaataatagattgt
ttcaagcctggcgacatagtgcgggcgcaagtcttgtcgttgggtgatggtactaattat
tacttatccactgcaaggaacgatcttggcgtagtttttgcgagagcattcaacggctgt
ggcggattgatgtatgcggtggactggcagacaatggccgctccaagtactggtacgacg
gagaagcgtaaatgtgcgagacctttctga

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