KEGG   Torulaspora globosa: HG536_0D02820
Entry
HG536_0D02820     CDS       T06981                                 
Name
(RefSeq) uncharacterized protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
tgb  Torulaspora globosa
Pathway
tgb03018  RNA degradation
tgb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tgb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HG536_0D02820
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HG536_0D02820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgb03019]
    HG536_0D02820
   03041 Spliceosome [BR:tgb03041]
    HG536_0D02820
Messenger RNA biogenesis [BR:tgb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     HG536_0D02820
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     HG536_0D02820
Spliceosome [BR:tgb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    HG536_0D02820
SSDB
Motif
Pfam: LSM Hfq Hfq_1
Other DBs
NCBI-GeneID: 59325927
NCBI-ProteinID: XP_037139434
UniProt: A0A7G3ZGX4
LinkDB
Position
4:complement(497760..498095)
AA seq 111 aa
MPQETQQPQQQRRKFEGPKREAILDLAKYKDTKVRVKLMGGRLVTGVLKGYDQLMNLVLD
ETLEYMRDPEDSSVILKDKTRSLGLIVIRGTVLLSLSPCDGSEVIYVQESN
NT seq 336 nt   +upstreamnt  +downstreamnt
atgccccaggaaacacagcaaccacagcagcaaagacgcaagttcgagggccccaagagg
gaggcaatccttgacttggccaagtacaaagataccaaggtccgcgtgaagcttatgggc
gggaggctggtaacaggcgtgctgaaaggttacgatcaactgatgaacctggtgctggac
gagactctggagtatatgcgcgaccccgaagattcgtctgttattctgaaagataagacg
agaagtctgggactgattgtcatcagaggcactgtcctgctgtcgctcagcccatgcgac
ggatccgaggttatctacgtccaggaaagtaactga

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