Torulaspora globosa: HG536_0D02820
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Entry
HG536_0D02820 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tgb
Torulaspora globosa
Pathway
tgb03018
RNA degradation
tgb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HG536_0D02820
09123 Folding, sorting and degradation
03018 RNA degradation
HG536_0D02820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0D02820
03041 Spliceosome [BR:
tgb03041
]
HG536_0D02820
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HG536_0D02820
mRNA degradation factors
5'-3' decay
Lsm complex
HG536_0D02820
Spliceosome [BR:
tgb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
HG536_0D02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Hfq_1
Motif
Other DBs
NCBI-GeneID:
59325927
NCBI-ProteinID:
XP_037139434
UniProt:
A0A7G3ZGX4
LinkDB
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Position
4:complement(497760..498095)
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AA seq
111 aa
AA seq
DB search
MPQETQQPQQQRRKFEGPKREAILDLAKYKDTKVRVKLMGGRLVTGVLKGYDQLMNLVLD
ETLEYMRDPEDSSVILKDKTRSLGLIVIRGTVLLSLSPCDGSEVIYVQESN
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgccccaggaaacacagcaaccacagcagcaaagacgcaagttcgagggccccaagagg
gaggcaatccttgacttggccaagtacaaagataccaaggtccgcgtgaagcttatgggc
gggaggctggtaacaggcgtgctgaaaggttacgatcaactgatgaacctggtgctggac
gagactctggagtatatgcgcgaccccgaagattcgtctgttattctgaaagataagacg
agaagtctgggactgattgtcatcagaggcactgtcctgctgtcgctcagcccatgcgac
ggatccgaggttatctacgtccaggaaagtaactga
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