Torulaspora globosa: HG536_0D05560
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Entry
HG536_0D05560 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12601
superkiller protein 8
Organism
tgb
Torulaspora globosa
Pathway
tgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG536_0D05560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0D05560
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
HG536_0D05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
EIF3I
BBS2_Mid
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
59326202
NCBI-ProteinID:
XP_037139709
UniProt:
A0A7G3ZHP9
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Position
4:1000263..1001549
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AA seq
428 aa
AA seq
DB search
MSNLFISTTNCGKAHEADIFGLAVCVPYTVTCSGDGSIKLWKNKLLDNEMARDHLITQFV
SKTGVHHVDVFHSVEKGGNEICVVACVAFSGEVFFYEVDVKNGSLRSLDLLSAKEKKRSY
WAVRWFKSEDQIVCHQFAATDVKGNTYVWRFHPFTHEIDEEAAQKERLKREAKLRRNNFQ
PLDEEPKEEHNDQNGTNLEVHLHLTAQGEIPVSQPVFATSLDISPNGLIATGFANGSVVV
SQLSTLRPVHSFEGFEIQGVEQNSNTVRAVRFSPLGTLLAVANDSGSFGCVTLYETEYGE
RVGSLSVPTHSSQTSIGSFAHDGWVFDLSFNTTGETLATCGYDGKVRVWEVKSRERVSTI
NLTANDIEDEKEILLEDENGNSLKVPPVFGVSFIAKGVRGGMGSDSNEGLCCVCMDRSVR
WFREAGGA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatctgttcatctcaaccacgaattgtggtaaagctcacgaagctgatatcttt
ggtctagctgtgtgtgtgccatacactgtaacatgctctggtgacggttcaatcaagctg
tggaaaaacaaactgttggataatgagatggctagagatcatttgattactcaattcgtc
agtaagactggagtccatcacgtagacgtgttccattctgttgagaaaggcggaaatgag
atctgcgtagtggcctgcgtagccttttctggcgaggtcttcttctatgaagtggatgtg
aagaatggttcactcaggagtctagatttactgtctgcgaaggagaagaagaggtcttac
tgggctgtgagatggttcaagagcgaggaccagatcgtgtgccaccagttcgccgctaca
gacgtcaaaggaaacacatacgtttggagattccatcctttcactcacgagatcgatgag
gaggcagcacagaaggagaggttgaagagggaggcaaagctgaggaggaacaactttcag
ccgctagatgaggagcctaaagaggagcacaatgaccagaatggcaccaatttggaggtt
catctgcatctcactgcgcaaggggagattccggtgtcacagccggtgtttgctacatcc
ctggacatttcgcccaacggtttgattgcgaccggattcgctaatggtagcgtagtcgtt
tcgcagctcagtactttgaggcctgtccatagctttgagggtttcgaaatacagggtgtg
gaacaaaacagcaatacagttcgtgctgttaggttctcgcccttgggaacgctgcttgct
gttgcgaacgactctggatcgttcggttgtgtcacgctgtatgaaacagaatacggcgaa
cgggtaggatcgctatcggtaccgactcatagctctcaaacaagcatagggtctttcgct
catgacggatgggtctttgacttatccttcaacaccaccggcgaaacgctggcgacatgt
ggttatgacggaaaagtcagagtctgggaggttaaatcaagagaacgggtctctacaatc
aatcttacggcaaatgatatcgaagacgagaaagagatcttgcttgaagatgagaatggc
aattccctgaaagttccaccggtattcggcgtcagcttcattgccaaaggtgttcgtggt
ggtatgggtagtgattcgaacgaaggattatgttgtgtatgtatggaccggagtgtaagg
tggtttagagaagctggtggtgcttga
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