Torulaspora globosa: HG536_0E02540
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Entry
HG536_0E02540 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K15542
polyadenylation factor subunit 2
Organism
tgb
Torulaspora globosa
Pathway
tgb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HG536_0E02540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0E02540
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
HG536_0E02540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
eIF2A
Beta-prop_WDR41
Beta-prop_Vps41
NBCH_WD40
WD_LRWD1
Beta-prop_NUP159_NUP214
PROPPIN
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Beta-prop_SPT8
Tricorn_2nd
VPS8_N
Beta-prop_NWD2_C
WDR54
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
59326539
NCBI-ProteinID:
XP_037140017
UniProt:
A0A7G3ZIK7
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All DBs
Position
5:complement(453727..455082)
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AA seq
451 aa
AA seq
DB search
MEDGNIQDQSQKRYLTQRRTVDISSPFEKLYFYRKHGIQLPTIEPESSYTTDIMPPCAYR
SRDRVINVTSKFTHLSSNKVKHVIPAIKWTPEGRRLVVATYSGEFSLWNGSSFNFESIMQ
AHDSAVTTMEYSHAGDWMVSGDSDGTIKIWQPNFNMVKELDRAHTECIRDVAFSSNDSKF
VTCSDDNILKIWNFSNGQQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWDPRVGQ
CISTILNFKHTVLKTRFQPTRGHLLAAISKDKSLRVFDIRHSLKELMVVRDEVDYMTLLW
SPINESMFTVASYDGSLKDFDLVQDLDAPIHTIPYAHDKCITSLSYNPVGHILASASKDR
TIRFWTRAKPLDPNAFDDPTYNDKKVNAWYFGINNGINAVREKSENGAAPPSADGTDGYS
LPPLSSSSNTSSLPGIDLVPSKTSSLPGLSI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaggatggtaatatacaggaccagtcgcagaaacgctacctcacacaacgtcgtacc
gtggacatcagctcgccctttgagaagctctatttctacaggaagcatggcatacagcta
cccacaattgagccagagtcgtcatacacaacagatataatgccaccgtgtgcatatcgg
tcaagagatcgtgtgattaatgttactagcaagtttacacatctgagttcgaataaggtt
aagcatgtaattcctgcgatcaaatggacgccagaaggtagaagacttgtggtagccacc
tatagtggcgaattttcgttgtggaatggttcatctttcaattttgagagcattatgcag
gctcatgattcagccgtgacaacgatggagtattcccatgcgggcgactggatggtgagt
ggagactcggacggtaccatcaagatatggcagccaaacttcaatatggttaaggaactg
gacagagcacacacggaatgtatccgtgacgtagcgtttagtagtaacgactcgaagttt
gtaacgtgttcagatgacaacatcttgaagatttggaatttcagcaatggtcagcaggag
agggttctgtcgggacatcattgggatgtcaaaagctgtgattggcaccctgaaatgggt
ctgatagcttcggcgtcaaaagataacctggtgaaactgtgggatcccagagtgggacaa
tgcatctcaacaatactgaatttcaagcataccgtcttgaagacaagattccagcctacg
agaggacacttattggcagccatctcgaaggataaatctcttcgagtgttcgatatcaga
catagcctaaaggaactgatggttgtcagagatgaagtcgattatatgactctactttgg
agccccatcaatgaatctatgtttacagttgctagttatgatggttcactaaaggatttt
gaccttgttcaggatctggatgcgcccatccacacgataccatatgcccatgataaatgc
ataacgtcgctatcgtacaacccggtcggacatatcctggcaagtgcttccaaagatagg
acgataagattttggaccagagcgaagccgctggatcctaatgctttcgacgatccaact
tataatgacaagaaggttaatgcatggtattttggcatcaataatggtattaatgcagtg
agagaaaagagtgaaaatggcgcagcacccccatcggctgatgggactgacggatatagt
ttgccaccactgtcatcctccagcaatacttcctctttacccgggatagatttagtgccg
tccaagacgtcaagtttacctggattgagtatatag
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