KEGG   Torulaspora globosa: HG536_0E02540
Entry
HG536_0E02540     CDS       T06981                                 
Name
(RefSeq) uncharacterized protein
  KO
K15542  polyadenylation factor subunit 2
Organism
tgb  Torulaspora globosa
Pathway
tgb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tgb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    HG536_0E02540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgb03019]
    HG536_0E02540
Messenger RNA biogenesis [BR:tgb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     HG536_0E02540
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_WDR3_2nd WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_TEP1_2nd WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WD40_RFWD3 eIF2A Beta-prop_WDR41 Beta-prop_Vps41 NBCH_WD40 WD_LRWD1 Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N PEP5_VPS11_N Beta-prop_SPT8 Tricorn_2nd VPS8_N Beta-prop_NWD2_C WDR54 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 59326539
NCBI-ProteinID: XP_037140017
UniProt: A0A7G3ZIK7
LinkDB
Position
5:complement(453727..455082)
AA seq 451 aa
MEDGNIQDQSQKRYLTQRRTVDISSPFEKLYFYRKHGIQLPTIEPESSYTTDIMPPCAYR
SRDRVINVTSKFTHLSSNKVKHVIPAIKWTPEGRRLVVATYSGEFSLWNGSSFNFESIMQ
AHDSAVTTMEYSHAGDWMVSGDSDGTIKIWQPNFNMVKELDRAHTECIRDVAFSSNDSKF
VTCSDDNILKIWNFSNGQQERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWDPRVGQ
CISTILNFKHTVLKTRFQPTRGHLLAAISKDKSLRVFDIRHSLKELMVVRDEVDYMTLLW
SPINESMFTVASYDGSLKDFDLVQDLDAPIHTIPYAHDKCITSLSYNPVGHILASASKDR
TIRFWTRAKPLDPNAFDDPTYNDKKVNAWYFGINNGINAVREKSENGAAPPSADGTDGYS
LPPLSSSSNTSSLPGIDLVPSKTSSLPGLSI
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggaggatggtaatatacaggaccagtcgcagaaacgctacctcacacaacgtcgtacc
gtggacatcagctcgccctttgagaagctctatttctacaggaagcatggcatacagcta
cccacaattgagccagagtcgtcatacacaacagatataatgccaccgtgtgcatatcgg
tcaagagatcgtgtgattaatgttactagcaagtttacacatctgagttcgaataaggtt
aagcatgtaattcctgcgatcaaatggacgccagaaggtagaagacttgtggtagccacc
tatagtggcgaattttcgttgtggaatggttcatctttcaattttgagagcattatgcag
gctcatgattcagccgtgacaacgatggagtattcccatgcgggcgactggatggtgagt
ggagactcggacggtaccatcaagatatggcagccaaacttcaatatggttaaggaactg
gacagagcacacacggaatgtatccgtgacgtagcgtttagtagtaacgactcgaagttt
gtaacgtgttcagatgacaacatcttgaagatttggaatttcagcaatggtcagcaggag
agggttctgtcgggacatcattgggatgtcaaaagctgtgattggcaccctgaaatgggt
ctgatagcttcggcgtcaaaagataacctggtgaaactgtgggatcccagagtgggacaa
tgcatctcaacaatactgaatttcaagcataccgtcttgaagacaagattccagcctacg
agaggacacttattggcagccatctcgaaggataaatctcttcgagtgttcgatatcaga
catagcctaaaggaactgatggttgtcagagatgaagtcgattatatgactctactttgg
agccccatcaatgaatctatgtttacagttgctagttatgatggttcactaaaggatttt
gaccttgttcaggatctggatgcgcccatccacacgataccatatgcccatgataaatgc
ataacgtcgctatcgtacaacccggtcggacatatcctggcaagtgcttccaaagatagg
acgataagattttggaccagagcgaagccgctggatcctaatgctttcgacgatccaact
tataatgacaagaaggttaatgcatggtattttggcatcaataatggtattaatgcagtg
agagaaaagagtgaaaatggcgcagcacccccatcggctgatgggactgacggatatagt
ttgccaccactgtcatcctccagcaatacttcctctttacccgggatagatttagtgccg
tccaagacgtcaagtttacctggattgagtatatag

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