Torulaspora globosa: HG536_0E02950
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Entry
HG536_0E02950 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K03679
exosome complex component RRP4
Organism
tgb
Torulaspora globosa
Pathway
tgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG536_0E02950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0E02950
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
HG536_0E02950
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
HG536_0E02950
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Motif
Pfam:
S1_RRP4
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
59326580
NCBI-ProteinID:
XP_037140058
UniProt:
A0A7G3ZIP8
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All DBs
Position
5:532594..533664
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AA seq
356 aa
AA seq
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MSEVITVVRRKGAFQQFGEIVEKLDEEDVDIEMTEASESGLEGEKSGLQVVTPGELVSEN
PGWMRGHGTYFLDNMTYSSVAGTVSKVNRLLSVIPLKSRYSPETGDHIVGRIAEVGNKRW
RVDIGGRQHAVLMLGSVNLPGGILRRKSESDELQMRSFLKEGDLLNAEVQSLFQDGSASL
HTRSLKYGKLRDGMFCQVPSSLIVRSKNHTHNLPGSVTVVLGVNGFIWLRKTSKMDSARD
APSGASMGSTGGPTGAKSLRADTVSITRLEEESSWQIYSDQNDPSITSSIRQTICRYANV
IKALAYCEIGITQERIVSAYEASMAYSAVGSLIEREVMESLGDDVLNAEKMRGSPF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagtgatcacagttgttaggaggaagggtgctttccagcaattcggcgagatt
gtggaaaaattggacgaggaagatgtagacatcgagatgacggaggcaagcgagagtgga
ttggagggcgagaagtcgggattgcaagttgttacgcctggtgagcttgtcagcgaaaat
ccaggctggatgaggggccatggcacgtattttttggataatatgacgtactcgtcagtc
gcgggaactgtgtcgaaagtgaacagactgttgtctgttataccgcttaaaagtcggtat
tcgcccgagaccggcgaccacatcgttggcagaatagcagaggtcggcaataagaggtgg
cgagtggacatcggcgggagacagcatgcggtgctgatgctggggtcggtgaacctgccg
ggtggcattttgagaaggaagtcagagagcgatgagttgcagatgagaagctttttgaag
gagggcgatctgctgaatgctgaagtacagtcactgttccaggacgggagtgcgtcgcta
cacactagatcgctcaagtatggaaaattgcgcgatggtatgttttgccaagtgccaagc
tcgttgatcgtaagatccaagaatcacacacataacctccccggcagcgtcactgtagtg
ctgggggtcaacgggttcatatggctgaggaaaacgtctaagatggacagcgccagagac
gcaccttcaggcgccagcatgggttccaccggtgggcccacgggagctaagtcgttacgt
gcagatacagtgtcgatcaccagattggaagaagagtcttcgtggcagatatattcggat
cagaacgacccttcgataaccagcagtattagacagaccatatgtcgctatgcgaacgtg
atcaaggcgcttgcgtattgcgagatcggtattacgcaggaaagaatcgtcagcgcttat
gaggcaagcatggcatattctgcagttggcagcctgatcgagagggaagtaatggagagc
ctaggagacgacgtgctcaacgcggaaaagatgagaggttcaccgttctga
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