Torulaspora globosa: HG536_0E03310
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Entry
HG536_0E03310 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K18748
protein SSD1
Organism
tgb
Torulaspora globosa
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0E03310
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
HG536_0E03310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
59326616
NCBI-ProteinID:
XP_037140094
UniProt:
A0A7G3ZIT4
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Position
5:588122..591892
Genome browser
AA seq
1256 aa
AA seq
DB search
MANHGPGSGNRGQANPMYVTTTGGKNNPKQIHVAHRRSQSELTNLMVEQFTLQKQLEMVQ
AKQQQLWIQQQQLAQQTGQFLGQPGNSNPSGNSGFLPPHPHFNNGNNSPTGNSGYRSRSH
SRNNSGFYDNNNSNSGHKKTGSQSSIYGHARRHSIGLNEAKKAAAEEQAKRVAGNVTVKI
ESSSPTIGSNEGGDQKTFDSQQSYKFPASGSAQSGHRRTNSSNQSSSFKFPATQSQYNQK
ENDNEGDDFIPTPTGHRRSRSRNNEYSPGINSNWRAQSQSLSQGQGQSQQPSPFNHRTSN
SRDFGYNSFNSLEPPAVFQAGHKHRTSNTSVHSFNSQNNPNARKSLFAPYLPQANIPELV
QEGRLVTGILRVNKKNRSDAWVSTEGVLDADVYICGSKDRNRALEGDLVAVELLVVDDVW
GSKKEKEEKKRRKDASSQHDYISLNSSDDYHNDASATATITSNTTSTGAASSSSSSVVGD
ESGQLEAKSAGDSEDQSPSKPGVRRKNSLKQRPTQKKNDDVEVEGQSLLLVEEEEINDDF
KPLYAGHVIAVLDRIPGQLFSGTLGLLRPSQQSHSDNNKPQQAPKIVWFKPTDKKVPLIA
IPTELAPKDFIENADKYADKLFVASIKRWPITSLHPFGILVSELGEINDPDTEIDSILRD
SNFLSNEYLDPKNPSLEKASFQALPMADESLQNRRQFVDQETYEIFSIYESSHFSDFAVH
VRENIDETGSIELGCHVVDATAYIEENSSLDRRARKRSTAVFMPQKVVDLLPQAVNASLT
FAAGKKSATISVVYTLDKKTLKVKSTWIGESTVQPFAPFVVDKLTSASPGSAQANFASIL
GKIASTFYAERIRMQGAELEVYLPLMASLDDEKVNVDLNILERPLGSTIISEIRTKVDSS
VAEKIYTKLGDYSFLRRQVQPVHTKMMSFQKKVQKFGYDIDISSSDALIQSILQIKDEDV
RTGVEILLFKTMPRARYFIAGKVDPDQYGHFALNLPLYTHFSAPLRRYADHVVHRQLKTV
LSGSPYNEDLESLKITSEYCNFKKDCAYQAQEQAVHLLLCKTINDMGNATGQLLTMATVL
QVYESSFDVFIPEFGIEKRVHGDQLPLIKAEFDPANRILELHWQPGVDSATFVPADEKNP
KSYRTSIKNKFRSTTAEIAAMEFEKKAKGEPLVSEILTKELSRLGLKVPKLRLPALKDNE
DPLDCFLSTAVTSKKNDNCIQEIHELQKVPVLLRAEVGMALPCLSVRALNPFLKKE
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccacggtccgggctcaggcaataggggccaggccaatcccatgtatgtgact
acaacaggtggaaagaacaatccgaaacagattcatgttgctcacagaagatctcaaagt
gaattaacaaatctgatggtggaacaatttactttacaaaaacagctggagatggtccag
gctaagcagcagcaattgtggatccagcagcagcagttggctcagcagactggacaattt
ctaggccaaccgggcaatagtaatccttcgggtaactcaggattcttgcctcctcaccca
catttcaataatggcaacaacagtccgacaggaaattctggttatagaagtagatcacat
tcaagaaataattctggattctacgataataataatagcaatagtgggcacaagaaaaca
ggatcacaatcgagcatatatgggcatgcaagaagacactccataggactgaacgaggca
aagaaagctgctgcagaggaacaggctaagagagtagctggaaatgtaactgtgaagatc
gagtcttcgtcacccacgatcggaagcaatgagggcggcgatcagaaaacgtttgactcc
cagcagtcttacaagtttccggcatccggttcggcgcaatcgggccaccgtcgtactaat
tcatcgaaccagtcgtcatcgttcaaatttcctgctacgcaatcgcagtacaaccaaaag
gaaaacgacaacgagggagatgattttattcccaccccaacagggcaccgccgctcaaga
tcgaggaataatgagtactcccctggtattaattccaactggagggcacagtcacaatcg
ctaagtcaaggacaaggccaaagtcaacaaccatctccgtttaatcacagaacttccaat
tccagagactttggatacaattctttcaacagtttggagcccccagcggttttccaggca
ggtcataaacatcgcacatcaaatacttcggtccacagtttcaactcacagaataaccca
aatgcgagaaaatcactgtttgccccttatttgcctcaggctaacatcccggaattggtc
caggaggggcgactagttaccgggatcctgcgtgtgaacaagaagaaccggtctgatgct
tgggtgtctacggagggcgtgctagacgcagatgtctacatttgcggatcaaaagaccgt
aacagagctttggagggagatctagtggccgtcgaattgttggtcgttgatgatgtgtgg
ggttcgaagaaggagaaggaagaaaagaagagaagaaaggatgcatcaagccagcatgac
tacatatcgttgaacagctctgatgactaccacaatgatgcaagcgctacggcaaccata
acgtctaatactacatccactggcgccgcttcgtcatcttcttcgtctgtagttggcgat
gaaagtggtcagctggaagcaaaatcagcaggcgactctgaagatcaatctccctcaaag
cctggtgtcagaagaaagaattctttgaagcagcgccctactcagaagaagaacgatgat
gttgaagttgagggccagtccctgttattggtcgaagaagaagagatcaatgatgatttc
aagccactttatgccggtcatgtcatcgctgtgctagacagaatacctggtcaacttttc
agcggaacgttgggactattgagaccttctcagcaatctcacagcgacaacaataaacca
cagcaagcaccaaagattgtctggttcaagcccacggataaaaaagttccattaattgca
atcccaacagaacttgcaccaaaggacttcatcgaaaatgctgacaaatatgcagacaag
ctttttgttgcgtccatcaagcgttggcctattacctctttgcatcctttcggtatcctg
gtatccgagctgggtgaaatcaatgaccctgatacggagattgactctattctcagagac
agcaatttcttgtctaatgaatatctagatccaaagaatccctctttggagaaagcaagt
tttcaagcattaccaatggcggacgaaagtttacagaacagaagacaatttgttgatcaa
gagacctatgagatcttctccatctacgaatcctcacatttttcagactttgctgttcat
gtaagagagaacatcgacgaaacgggctcgattgaacttgggtgccatgtagtagatgca
acagcttatatcgaagaaaattcctcactcgacagaagggctagaaaaagatccactgct
gtattcatgcctcagaaagtcgtcgatttgctgcctcaagctgtgaacgcatcattaact
tttgctgctggcaaaaagtcagcgaccatatcagttgtctatacgttagacaagaagaca
ctcaaagtcaaatctacgtggattggagaatccaccgtacagcccttcgctccgtttgtg
gtggataagctgacaagcgcaagtccaggaagcgcacaagcaaattttgcttcaatcctg
ggaaagattgcgtctacattttatgctgagcgtataaggatgcaaggggctgaactggag
gtttatttgccattgatggctagcttggacgacgagaaggttaacgtggatctaaatata
ctcgaaagaccattggggtcaacaatcattagcgagattaggacaaaagttgacagctct
gttgcagagaagatatacacaaagctgggagactatagcttccttagaagacaggttcag
ccagtgcacacgaaaatgatgtcattccagaagaaagttcagaaattcggctatgacatt
gatataagctcatctgacgccctgattcaatcgatactccagatcaaggatgaagatgta
agaactggcgtggaaatattactattcaaaactatgccaagagctcgttactttattgct
ggtaaagtagaccccgaccaatatggccatttcgcattgaaccttcctttgtatacacat
ttctctgctcccttgagaagatatgctgatcatgttgtccacagacaactgaagacggta
cttagcggcagcccatataacgaggatctcgaatctttgaagataacctccgagtactgc
aacttcaagaaggattgcgcctatcaagctcaggaacaagctgttcatttgttgctttgt
aagacgataaacgatatgggaaatgctacaggtcaactactgacaatggccacggtattg
caagtttacgaatcttctttcgacgttttcattcctgagtttggtattgagaaaagagta
catggcgatcagctaccgttgatcaaagccgaatttgatcctgctaatagaatcctggag
cttcattggcaacctggcgtagacagtgctaccttcgtccctgctgatgaaaaaaacccc
aagtcttacagaacatcgatcaagaacaaatttagatccaccactgctgagattgcagcg
atggaatttgagaaaaaggcgaaaggcgaacctctagtaagtgaaatcttgacgaaagaa
ctgtccaggcttggtttgaaggtccccaaattaaggcttccagccctgaaagataatgaa
gacccactcgactgcttcctcagtaccgccgttacaagtaagaaaaatgacaactgcatt
caggagattcatgaactacagaaagtgcctgtgcttctcagggcggaagtgggcatggca
ctcccttgtctttctgtgcgtgccctaaatcctttcttaaagaaggagtaa
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