Torulaspora globosa: HG536_0F00290
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Entry
HG536_0F00290 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
tgb
Torulaspora globosa
Pathway
tgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG536_0F00290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0F00290
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
HG536_0F00290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_22
TPR_19
TPR_16
TPR_2
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_12
TPR_8
ANAPC3
ARM_TT21_N
TPR_7
TPR_1
Motif
Other DBs
NCBI-GeneID:
59326920
NCBI-ProteinID:
XP_037140379
UniProt:
A0A7G3ZJL9
LinkDB
All DBs
Position
6:complement(61894..66087)
Genome browser
AA seq
1397 aa
AA seq
DB search
MSTVKDLLKEAKAELAREDYEEAAKISLQVLKQDQSNYFAQVFLGKSYSCMEGKAREAVH
RYKVAIELAPENLLAWKGLFLFLNGGPVVPEVVSYDEYFDLSGEYARILCEQQQSQVELI
HELRAFRKKKPDSRESFLWHMVPGNPMAEQLGRHLITPQAALKELIDILDSKEKAYVSKI
VSRERLKFSAQDPDYQIKMNSLAWDVYQNSKLDHLFNQLINITDDDDERAELETRWLEYR
LLVLKSMPKEIKSSFYEQVKRMVDDMVLVDHRSSTAWRLYFEWQDYADLDNMDQELILKF
FKKFPLEPLAIILYAWLSSNLSKYDIKKLNASLDQPSEPEEGRELADIDESEKNALNDMM
EKENETSGLLEEEVVDALLDNIPKAQNSILANRIVSQYYLLSKEYEAALPYVKTGISVIA
YNIRDLGGRFANSKKQFTLSLAILYTYIDPPKNHNAALSLFEKILADDPDNTHAKLGKGL
IFVERAEWEKANVLLSEVSAQFPDNMEVLSELAWNEAQLGLLEEAVSKFKTVLAASEGTD
LRSAEFRALNLWRQAKVYIMLEERDGSEDLNYVKVAFKQLVNSIKVLDTFAANYSTLGDI
YSSFFEDKVRAFKCYYKAFELNARDATAAKYMAEHYANLTNWQAASTVAKRLISAESNRK
KLKDMNWAYRAVGIFYLETQDEAASIEWFQGALRINPTDVESLIGLGQAYHACGRVEAST
KVFDRALEIDSEHFHCQYLKAQSLAAMGEYVESINILERITALSPREEIYQIMLASVSVD
YAIDLYSQGLLTKSIAISEGVIETLQYAIIELHCSGQLLWLVLSKALGLFVTIASKVDKL
PIESLVGIFRAFDATESTRVIDDIDGITFDQVLSAIDDSSISIACKFLILSAKYSFSTTK
LEEQSRTVRSSLWHNVGSAELTAYHVLKEVKYRDAAIACYKASIHQQSNAVESWIGLGVA
TMDVNYRVAQHCFIKASALSPRDADVWFDLAVLGLKNNDVEFSKDVLNRSQSLSPQNSSP
WLGFALVHEMEGNIVDSHRMFAHAFVLSNGKSKVAQLLYAKSVLERRIGDSFDERDLEAA
EELATAAYGLDQYFKENPRDNFALQCALLIFERLHLYPNAHRVSNDLVELLEIKFEKAQS
DEDLYNYAIIKAQIARIKLGFGEFQLAIDDAKISESILTEFAGRDTSMISLSNQISLSLA
NFFLQNYDETLQSLQEVLKASKTSRHLSILTAKILYDMGSDEAKEIALEELMEYVSQNGP
ELLVGFTIAAIAIVEQKTDDLKVILGELTGMSLSNLIADKHKDLPYLIEQIKARLELKAK
PVTSWQRSSFFFMNDHSTWTAVDKKISLRVAADGQNKINVNQLSALYCMQKDVRSVQRSL
FLAPWNKTAISALRQCF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgtcaaggatttgctgaaggaggccaaggcagagttggcaagggaggactac
gaagaagcagctaagatatctctgcaagtactgaagcaggatcagtccaactactttgca
caagtgttcctcggaaaatcttactcctgtatggaaggaaaggctagggaagctgtacat
cgctataaagtagccattgagttggcaccagaaaatctgctcgcatggaagggactcttt
ctgtttctaaatggcggccccgttgtgcctgaagtggtatcatatgatgagtactttgat
ctcagcggcgagtatgccaggatactatgcgagcagcagcagtctcaggtggagctaatc
catgagctacgagccttccgaaagaagaagcctgacagcagagaatctttcctgtggcat
atggtgcccggaaacccgatggcagagcaacttggtcggcatctgatcactcctcaggct
gctttgaaggaattgattgatatcttggactcgaaagagaaggcttacgtttccaagatc
gttagccgggaaagactgaagttcagtgcgcaggaccctgactatcagataaaaatgaac
tcgctggcatgggacgtttaccagaactcgaagttagatcatctatttaatcaattgatc
aatattaccgatgacgatgatgaaagagccgagttggagaccaggtggctggaataccga
ctgctagttttgaaatcgatgcctaaagaaatcaagagctcattttatgagcaggttaaa
agaatggtggatgacatggttcttgtggaccatagatcatcaacagcttggagactgtac
tttgaatggcaagactatgctgatctcgataatatggatcaagagcttatactgaaattt
tttaaaaagttcccgctagaacccttggcaatcattctatatgcttggctgtcatcaaac
ctttccaaatatgatattaagaagttgaatgcatctctggatcagccctctgagccagag
gaaggtcgggagctggctgatattgatgaaagtgagaagaatgccttgaacgatatgatg
gaaaaagagaatgaaacgtcaggtcttctggaggaggaagtcgtggacgctttacttgat
aacattcccaaggctcagaacagcatccttgcgaacagaatagtatcgcaatactattta
ctctcgaaagaatacgaagctgcgttaccatatgttaagaccggtatatctgttattgcc
tacaatataagggatttaggaggccgttttgctaactccaagaagcagttcacattgagc
ctggcgatcttgtatacctacattgatcctcccaaaaatcataatgcagctctgagcctg
tttgaaaagattctggccgatgatccagataacacacatgccaagctgggaaagggactc
atttttgttgagagggcggaatgggaaaaggctaacgtattactgagtgaggtttcagcg
caatttcctgataacatggaggtactttctgagctagcttggaacgaggctcagcttgga
ctactagaagaggctgtttcaaaattcaaaactgtactggcggcaagcgaaggaactgac
cttcgatcggcggaatttagggctctgaacctttggagacaagctaaagtttacattatg
cttgaagaaagagatggctctgaggatcttaattatgtgaaagttgcttttaagcagttg
gtcaattccatcaaagttctagacacatttgctgctaattattcgactcttggcgatatc
tattcttcctttttcgaagataaggtaagagcatttaaatgttattataaggcatttgaa
cttaatgctagagacgctactgcagctaaatacatggctgagcactatgcgaacttgact
aattggcaagctgcttccaccgtggctaagagattgataagtgcagagagcaataggaaa
aagttgaaagacatgaattgggcgtatagagcagttggtatattttatttggaaacacaa
gatgaggctgcttccattgagtggtttcagggagctcttcgtataaatcccaccgacgtt
gaatccctaattggtttaggtcaagcatatcacgcctgtggtcgtgtcgaggcctcaaca
aaagttttcgacagagctttagaaattgattcagagcactttcattgccaatatttgaaa
gcccagtcgctcgccgcgatgggtgaatatgttgaaagcatcaatatattggaaagaatt
acagcgctatctcctagggaagaaatatatcagatcatgcttgcaagcgtttctgttgat
tatgctatagacctgtactcccagggacttctaacgaagtcgatagcaatttccgaaggc
gtcattgaaactctacagtatgcaattatagagcttcactgcagtggacagctcttgtgg
ttggtactttcaaaggcattgggtttatttgtgacaatcgcttccaaggtggacaagctg
cccattgaatcgctagttggcattttcagagcatttgacgctactgaatcgactcgggtg
attgacgatattgatggtattacttttgaccaagtgttgtcggctatcgacgatagcagt
atatcaattgcatgcaagtttctgattttatctgccaagtacagcttctcaacaacgaag
cttgaagagcagtctagaacggtcagatcctccctatggcataacgtcggaagcgcggag
ttgactgcttatcatgtcctcaaggaagtgaaatacagagatgcggccatcgcttgttac
aaagcttccattcatcagcagtcgaatgctgtagaatcatggataggtttgggtgtggca
actatggatgtaaactatcgggtagctcagcattgctttatcaaagcttcagcattgtcg
ccgagagacgcagacgtgtggtttgatctggccgtattgggattgaagaataacgatgtg
gagttttccaaggatgttctcaatcggtcacaaagtttgtctcctcagaattcctcgcca
tggctaggatttgcattagtacacgaaatggaaggaaatatagtggatagtcacaggatg
ttcgcacatgccttcgtcttgtctaatggcaaatcgaaagttgctcaacttctttatgcg
aaaagtgttttagagcgtagaattggcgactcttttgacgaaagggacctcgaagcagct
gaagaactagcaacggcggcttacgggctcgatcagtacttcaaagaaaacccgcgggac
aattttgcacttcaatgtgcattactgatttttgagagactgcatttgtatcccaatgca
catcgtgtctccaacgacctagttgaactgctggaaataaagttcgagaaagctcagagt
gacgaagatctttacaattatgcgataataaaggcccagattgcccgcattaaacttgga
tttggcgaatttcagttagccatagatgatgccaaaatttcggaaagtatattaactgaa
ttcgcgggccgcgacacatcaatgattagcctatctaaccaaatatccttgagtttggct
aacttctttttacagaattatgatgagacgctgcaaagcctgcaggaagtacttaaagct
tcaaaaacttcaagacatttgagtattttaacagcgaaaatcctttatgacatgggctca
gatgaagccaaagagattgcgttggaagagttgatggaatatgtttcgcagaatggacct
gaattgcttgttggctttaccattgccgctattgccattgtcgaacaaaagacggacgat
ttgaaagttattttaggagagttgacaggaatgtcgttatcaaatttgatcgcggataag
cacaaggaccttccctatctgatagaacagatcaaggcccggttagaattaaaggccaag
ccggtcacctcatggcaaagaagctcattctttttcatgaatgatcacagtacttggact
gcggttgacaagaaaatatccctcagagtagctgcggatgggcagaataagataaatgta
aaccagctaagcgcactctattgtatgcaaaaagatgttagaagtgttcaaagaagtctg
tttttggcaccttggaataaaacagctatatccgctctgaggcaatgcttttag
DBGET
integrated database retrieval system
