Torulaspora globosa: HG536_0F03890
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Entry
HG536_0F03890 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
tgb
Torulaspora globosa
Pathway
tgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG536_0F03890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0F03890
Enzymes [BR:
tgb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
HG536_0F03890
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HG536_0F03890
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
HG536_0F03890
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
Motif
Other DBs
NCBI-GeneID:
59327279
NCBI-ProteinID:
XP_037140738
UniProt:
A0A7G3ZKM8
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All DBs
Position
6:734176..736587
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AA seq
803 aa
AA seq
DB search
MNNPSILSYPSLGPQHQPNIIPGMQAGTPTGIHQQLQGNPLLGGTSGGGGTMPPPGMMKP
NIGGANDGAALQLLNHLGTGSGKVAGTNSGTVTGSVNGNEKNPLYHLHLEEPGLLNNPIW
KLQLQLAAVSAQSMGQPNVYARQNAMKKYLVNQQQQQQSLDHQRQPGLLQQVSGSQTQLQ
TTEQQPQNPQMAVASVSLVDKTKQLLMEMAADIKDTAASSNNGISNPPGSANTSATANTS
GSASSPSTPKTELHNLRDQNTGTPVLLLQHKKLSQFNIDEDDELEHRMAGPKNTKFDDQL
WHAIDFSNLQIFNISANLFKYTFLTRLYLNGNSLTSIPPAIKSLVNLRVLDLSHNKLTSL
PKEMGHCYQLKYLYVFDNMITTLPWEFGSLFNLQFLGCEGNPLDKQLLKILTEKSVTGLI
FYLRDNRPEVPMTKDRDFIEINADGDPVEKYKSLQEADEHLSRDLAKRSFTVLSYNTLCQ
HYATPKMYRYTPSWALSWDYRREKLTEQILSYMSDVICLQEVEAKTFEDYWAPLMQKHGY
SGLFHAKTRAKTMHSKDSKKVDGCCVFYKKSEFRVIFKDAVDFSGVWMKHKKFQRTEDYL
NRAMNKDNVAIYLKLEHIESGEHVWLVTTHLHWDPQFNDVKTFQVGVLMDHMEDLLREQS
NAQSKQEIKKCSVILCGDLNSEIDSAVYELLSTGRVQTHDDVKGRDFGYMTQKNFAHNLS
MKSSYSHIGELPLTNFTPSFTSVIDYIWFSTQSLRVRGLLGPIDSDYISEFIGFPNAKFP
SDHIPILARFEFVKGGAGSSRKI
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatccttctatattgagttatccaagccttggtccacaacaccaaccgaacatt
atacccggtatgcaggcgggtactccgacagggattcatcagcagttacaggggaaccca
ctactaggcggcacaagcggaggcggaggtacaatgccacctcctggaatgatgaaacct
aatatcggtggtgcaaatgacggtgctgctttgcagttgttgaaccatcttggcaccggt
agtggtaaggtagctgggacgaacagtggcactgtgacgggatctgtcaatggaaacgag
aaaaatccgctttatcatctacatttggaagaacctgggcttttgaacaatcctatatgg
aaattacagttgcagctggcagcggtttccgcacaatcgatgggacaaccgaacgtttac
gccagacagaatgcgatgaaaaaatatttagtcaatcagcagcagcaacagcaatcgttg
gatcaccagcgacagccgggtctgcttcagcaggtctctggatcgcagacacaattgcaa
accacagagcaacagccgcagaatccgcagatggccgtcgcgtctgtttctttagtggat
aagactaaacagcttttgatggaaatggctgcagatataaaagacactgcagcaagcagc
aataacggcattagcaacccgccaggttctgcgaatacttcggctacggccaacacaagc
ggctctgcctcgtctccttctacccccaagactgagttacataacttaagggaccagaat
acaggaacgcctgtattacttctacagcataagaaactatcacaattcaatatagatgaa
gacgatgagctagaacatcgaatggcgggacccaagaataccaaatttgatgaccagctg
tggcatgcgatcgatttttccaacttacaaattttcaacattagtgccaatctattcaag
tacacttttttgacaaggttatacttgaacggtaatagtttgacttctatcccgccagca
ataaagtcattggttaatctacgtgtgttggatttgtctcacaacaagctgaccagtttg
ccgaaagaaatgggacactgttaccaactgaagtatctttatgtctttgacaacatgatt
acaactttgccttgggagtttggtagtctcttcaatctgcaatttctgggttgcgaaggc
aatcctctggacaaacaattattaaaaatcctaacagagaaatcggtgacaggcttaata
ttttatcttcgtgataatagaccggaagtacccatgaccaaggatcgggactttatagag
atcaacgctgatggcgatcctgtggagaaatacaaatcactgcaggaggccgatgaacat
ttaagtcgagatttggccaagagaagtttcactgtgctatcctacaacacactgtgccaa
cattacgcgactccaaagatgtatcgttacacgccatcatgggctctgagttgggattat
agacgtgaaaaactgacggaacaaattttgtcttacatgagtgatgttatctgtttgcaa
gaagtggaagctaaaacttttgaggattattgggcgcctttgatgcagaaacacggctac
tcaggcttgttccatgccaagacgagggcaaaaactatgcactcgaaggattcgaaaaag
gtagacggttgttgtgttttctacaagaaatcggagtttagagtcattttcaaggacgca
gttgatttcagtggagtttggatgaaacataagaaatttcaacgtactgaagattatttg
aatcgcgcaatgaacaaagataatgttgcgatttacctgaagttggaacacatcgaaagt
ggcgagcacgtctggctcgtcacgacgcatttgcactgggatcctcaatttaatgatgtg
aaaacgttccaagtaggtgtcctgatggatcacatggaagaccttctcagggaacagagc
aatgcccaatccaagcaggaaattaagaagtgctcggtgatcctatgtggtgacttgaac
tcagagatagactcagcagtctatgagcttctaagcactggccgtgtgcaaacacatgat
gacgttaaaggaagagattttggttacatgacgcagaagaatttcgcccataacttgtct
atgaaatcaagttatagccacattggcgaactacctctaacaaattttacgccttcgttc
accagcgtgattgactatatatggttttcaactcagtcactccgggttcgcggactgctc
ggcccaatagattcagattacatatccgaattcatcgggttccccaacgctaaatttcca
agtgatcacattcccatattggcgaggttcgaattcgtaaaaggaggagccggctccagc
agaaagatatga
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