Torulaspora globosa: HG536_0G04410
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Entry
HG536_0G04410 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12830
splicing factor 3B subunit 3
Organism
tgb
Torulaspora globosa
Pathway
tgb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HG536_0G04410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgb03021
]
HG536_0G04410
03041 Spliceosome [BR:
tgb03041
]
HG536_0G04410
03036 Chromosome and associated proteins [BR:
tgb03036
]
HG536_0G04410
Transcription machinery [BR:
tgb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
HG536_0G04410
Spliceosome [BR:
tgb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
HG536_0G04410
Complex B
HG536_0G04410
Complex C
U2 SnRNP specific factors
HG536_0G04410
Chromosome and associated proteins [BR:
tgb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
HG536_0G04410
TFTC complex
HG536_0G04410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_RIG_2nd
CENP-C_C
Motif
Other DBs
NCBI-GeneID:
59327820
NCBI-ProteinID:
XP_037141253
UniProt:
A0A7G3ZM43
LinkDB
All DBs
Position
7:786512..790384
Genome browser
AA seq
1290 aa
AA seq
DB search
MLVQESELYLYHLTLKRQSNYVHSCIGHFVEEKSSDKTKRPKDLQLCIATETHIELYDVA
DGALLKLAEVPIFATITAMESFRVENVRESFLAMVSDSGNLTIAKFNRRSNVDISLETLI
NHPMTRSQIRRTSPASFLKVDTFGRCILVSAVEKNKLCFVVNEGGDGSVMIQSPLEVIRP
EVLTLDLVSCDVQYDNPCFASIEIDTLQNKNDHHLVFYVLDLGLNFVVKKADYTINGEAN
FLMGLPVLSKYNINCANEKDAHDEINPFVLIGFQDYLLVKDMSGLFSLKVQIPKRAEESS
QKVSIISSAIQMLKNSFFILLQSNLGDLYRLTIEANEEDRNRPVVSISYFDTIFQAEKLH
IFRNGYLYANSELNDNYLFQFDSLGDDNTEILSSRDPKEQLFFKPSKTLKNISIVSHRKN
LNPLLTTQVLKAHPLMIAAGTTSKSRLLSNGVNFEEQISSPLPPGAQDLWTIKPSGQSFH
KLLFLGFSKSTMVLKIDEGSIEELSIPQNPFKLNGDRTVLVATLGYRSTIQVCENELRQV
VPSGDEMNQFSLKLEWFPPAGIRIVTATSSETQLCLGLSNNELVYFEISEQTDALHESQN
RIEIEEPISIVAMSASRRSDFLAVGTKDSTVEIVSLKMSDTEEFMEVVSIQTLLAPVNSL
RVIENKDLELHIGLQNGVYYRSKINRHDGQIYDVRTKFIGPKPIVLSSLKSTSLSLTSDK
EDDEEENAEGNEDSTDDKCHCVVLHCTKTWISYTKNKLLNIRPVLFSRLSGLSTLCEFVA
EETSINVCCAISSSGSLVIGRLTDFVCRQKWFQVTDTPLERILGKEADKESDSTKGGDEV
EGDEEDENEEEEEEESLTLQWHTYDRTKFLAFPEDRGLFLQLESSSTQNGARISISKNQQ
RYQSAQGCEIFKTLPNINVLAASLVKFASNVDHLVISSRDGVLHTFEISLDKGKCQFNLR
AIHETVIEGQVRAMIPFADKLLVPAFGSLILFGLGKKQLLKQSISETTLSMTKVTALANW
RNERIAVGDGHESVTLFVFDKTKKSFVPIADDTIKRHTISLAFLDPSTILGGDRFGNIWT
LRLSKEYEGMISTSLPPVVERMQQLPSLKRKAPNIMECPFKLTQTNMFYINDIAMDFHVL
QSVQMSDRPAIIYSGLQGTIGCLTPLLSKAEITKLKTIETVMSEADDKFYMKHEIERRGN
EAPTAVEDAEIGALRASHNGIPEGSNSIVGREQSRYRGYYAPVRNVIDGDLCERFLDLLP
AEQSFLCAELKTLQPDAVVRSLNDIRTNYM
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgcaggagtctgagctgtatctgtaccacttgacattgaagcgacagtccaat
tatgttcattcatgcatcggtcactttgtagaggagaaaagttcagacaagactaagcgg
ccaaaggatttgcagctttgcatcgcgacagagactcacattgagctctatgacgtagct
gacggcgctcttttgaaattggctgaggttcccatttttgctacaataacagctatggag
tcttttcgtgtggaaaacgtcagggaatcgtttctggcaatggtgtccgattccgggaat
ctgactatagctaaattcaatagacgatcaaatgtcgatatttctttggaaacgttgatc
aaccatccaatgacaagatcacagatacgaagaacgtcgccagcttcgtttttaaaggtc
gatactttcggaagatgcattttagtgtcagctgtggaaaaaaacaagctttgttttgtg
gtcaacgagggcggcgatggatctgtgatgatacagtcgccgctggaggtgattagaccc
gaggttctgactctggatttggtatcatgcgatgtgcaatatgacaacccgtgtttcgcc
tcaatcgagatagatactttgcaaaataaaaacgatcatcacctggtgttttatgttctg
gatttgggtttaaattttgttgtgaagaaagcggactataccataaatggagaagccaat
tttctgatgggattgcccgttttgtccaagtataacatcaactgtgccaacgaaaaggat
gcacacgacgagatcaacccatttgtgcttataggattccaggactaccttttagttaaa
gacatgagcgggctctttagcttgaaagttcaaatccctaaacgggccgaagaaagcagc
caaaaagtttcgataatttcatctgctatacaaatgctcaagaatagcttcttcattctt
ttacagtcaaacttaggtgacttgtaccgactgaccattgaagcgaatgaagaggacaga
aacagacccgttgtctcaatctcttacttcgacacaatatttcaggcagaaaagctgcat
atcttcagaaatgggtatctttatgctaattcagagctgaatgacaactatttatttcaa
ttcgacagcctgggtgatgacaatactgagattttaagctcgcgcgatcccaaggaacaa
ttattcttcaagccatcgaagactttaaagaatatcagcattgtatcgcatagaaaaaat
ctcaatccattgctgaccactcaagtactcaaagcccacccacttatgatagcagctggc
acaacctcgaaatcgaggctattatcaaacggtgtaaacttcgaagaacaaatctcgtcc
cccttgccgccgggggctcaggatctatggacgataaaaccatctggtcagtcctttcac
aaattgctgtttttgggtttttcgaagtcgactatggtattgaaaatcgatgaaggatcc
atcgaggaattgagcatacctcagaatccattcaagctaaacggagatcggacagtttta
gtagcgacattgggttatcgatcaaccattcaggtgtgcgaaaatgaacttcgacaggtc
gtgcctagcggcgatgagatgaaccaattttctttaaaactggagtggtttcctcccgcg
ggaattcgtattgtgacagcaactagttccgaaacgcaactttgcctaggtttatctaac
aatgagcttgtttactttgagataagcgagcagactgacgctctacatgaatcacagaac
agaatagaaattgaggagcccataagcatcgtggcgatgagcgcttcgcgacgaagcgac
tttctggctgttggtacgaaggactctactgtagaaattgtctctttgaaaatgtcagac
acggaagaatttatggaagttgtttcgatacagacgctgcttgcgccagtcaatagcctg
cgggttatagagaataaggacttagaactgcatattggattacaaaatggtgtctactat
cgttcaaaaataaataggcatgatgggcaaatttacgacgtcagaacgaaattcatagga
cccaagccaattgtcctctcgtctcttaagtctacatcgctcagtttgacttcagataaa
gaggatgatgaggaagaaaacgcagaagggaacgaggacagcactgatgataaatgccat
tgtgtagtacttcactgtacaaagacctggattagttacaccaaaaacaagctactcaat
attcgtccggtgcttttctcccgcctaagtggcctatcgactctatgtgaatttgttgct
gaggagaccagtattaatgtttgctgtgcaatcagctcgtcgggctctctagtgattgga
agattgaccgattttgtttgcagacagaaatggtttcaagtaacagacactcccttggaa
aggattttaggcaaggaagctgataaagagagcgatagcactaagggtggagacgaagtg
gagggagatgaagaggacgagaacgaggaagaggaggaagaagaaagcctcacgctacaa
tggcatacatatgacaggaccaagtttctagcatttcctgaggataggggacttttcctg
cagctcgagagctcaagtacacaaaatggagctcgaataagtataagcaagaaccagcag
cgatatcaaagcgcccaaggttgtgaaattttcaagactctaccgaatatcaatgtcttg
gcggcatcattagtcaaatttgcaagcaatgtcgatcatcttgtgatatcatccagagat
ggagtacttcacacgtttgaaatctcgcttgataaaggcaaatgccaatttaatttgaga
gcgattcatgaaaccgtgatagaaggccaagtgcgtgctatgattcctttcgctgataag
ctattagttcctgctttcggcagtctaattttgttcggattaggtaaaaagcagttgttg
aaacaatccatctcggaaactactctctcgatgaccaaagtcaccgctcttgcaaactgg
cgaaatgaacggattgcagtcggagacggccatgaatctgtgactctcttcgtctttgat
aaaacaaagaagtcttttgttcccattgccgatgacaccattaaaagacatactatatct
ctagcttttctcgatccttcgacaatattgggcggcgacaggtttggtaacatatggacc
ttgagattgagcaaggaatatgaaggcatgatatcaacatctcttccacctgtggtcgaa
agaatgcaacagctaccgtctttgaagaggaaagctcctaatattatggagtgtcctttc
aagcttactcaaactaacatgttctacattaacgatatagcgatggattttcacgtttta
caatctgttcagatgtctgataggccagccataatatactccggattacagggaactata
ggctgtctgactccgttgctatccaaggcagaaataactaagttgaagaccatcgaaacc
gttatgagtgaagctgatgacaaattttacatgaagcacgagattgagaggcgaggaaat
gaggcacctacagctgtggaagacgccgagattggagctctgcgtgcaagtcacaacggc
atccctgagggttcaaattccatcgttggcagggaacaatcaagatacagaggctattat
gcaccggtaagaaacgtgattgacggtgacctctgcgagagatttctagatcttctcccg
gcagaacagagcttcctctgtgccgaattaaagactctacagcctgatgctgtggtccgg
agtctaaacgacattaggactaactatatgtaa
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