Torulaspora globosa: HG536_0H01000
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Entry
HG536_0H01000 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
tgb
Torulaspora globosa
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgb03009
]
HG536_0H01000
04121 Ubiquitin system [BR:
tgb04121
]
HG536_0H01000
Enzymes [BR:
tgb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
HG536_0H01000
Ribosome biogenesis [BR:
tgb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HG536_0H01000
Ubiquitin system [BR:
tgb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
HG536_0H01000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
zf-RING_2
FANCL_C
zf-rbx1
zf-ANAPC11
zf-RING-like
RINGv
zf-C3HC4
zf-RING_16
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
59327991
NCBI-ProteinID:
XP_037141399
UniProt:
A0A7G3ZMI9
LinkDB
All DBs
Position
8:172245..176933
Genome browser
AA seq
1562 aa
AA seq
DB search
MSFGGVNTFQQYSTDFGFGHNGVKLSFNYFDGFPEPSLLNSLASNDLKLIFKSLLKRDET
TKEKALNDLLKLVENYTKNEGLFDSDIFFLCWSQVYPKLLVSESKTIRVSSHLVTSKLVK
LLNKKVSKFLRDVMPLLLLGTCDTDSSVSKACNAFLNDIFDCNTSKVNSLWSVFQEDILK
ITEELVVKENEETISDERFVGKEDSLLRFNRLITSAMQLLTNLISSDSFDSVKHEEITHD
VLISECLWQLLSLTNTHFLKSYEAALVLQKTLYKNNLLQRHKDVLKLSTKKLLKSLSHVN
AKNSLKVAHLAGPILDNLTMLDHYQKGKIWTYDKSARDRFLQFVVAASKNPVPGFFDALY
KFYEESSSHELLDEKKQWLPLWRGSNDTLREKQFLGRHGPELLGEFWANYRKFISHCSVP
DVSEVAKEDVLNILRSGKQLSRLPSLKAALIDFLDPEIVANQIKAAVNQDDKEAGLLLNN
LMLLLCSAANGEAALHDVASAMLELMSKDQDDFGPKKQKVLEVYSYFVNSGIISVADEVT
QFVYEVPTWIDKNTYKSLSIFISDYSKSVIAHKDKNFATVMEDFITAASSAEGIAESRIV
RTLNLLDNGVSPAVLSSTIVQDFVQNYINSYAYNDYGELFNGRLIDEHNVVQLYEKSVEG
KQTEFFLHHLSSLNYHALEALLTESDFLSGNLFEGSLEQAESIYQLIKPLLNNGPIVKNL
ANAIISYAKTKPRLVGNDFVLRIAEELITLQRDGLDIFVPPDLELVFFDAVPFIDYRLAL
VSSLKLNTHLFELSSDELNLSKAEQLIRYGLFLDALISRVPAGLDNKLSVFLTMVCDLAE
DFNCLSEDPQEEITEFKNTLFRGKLEGFSFEDVTDLVCQVNPNDERPLDILSHLIADSSS
ITVTYYHLRILQKILQNKIDSITSASFIRKLPSIERFVISTIRSKDKSQHNYLLCGIILS
AAEKFTDLEIFGKLRNVLASECIGVKENELLEKSYKNIILLSNLLQSQGSTESPPPIPYQ
RLNMMLNSLSQWLDSDLAYESGFTQVRLSLLKLCALLARTPSITEASKGFYEFSMALLSD
SLSMCLLDDTYFLLELRLYCLVLHEELTKSVWKQHLNTGSDEMLSGLVELSLINFATEKN
NQISAVFYRTLFRVLSGYQVKQVVKFYPDVLSAFLSNEGFANINRTRMLFAELKRLVIER
QKDAFLELEFEKQKKQKKETEHQSDEGAGEDLPVNDKFELPPGLIEKMCVEIPEDYLECE
DEYGFLKYLWFWDLAFCFFNDASYDLRQKFIDQLRSRNLITIFFDFVSDQIDLQDTRFWS
EAGSAAIQEYSVQSNDFSPYREDLYPECKKLLGHSMYNMFLNVGSLTSNWWLNIKDRTLQ
AKIEKFVTTFISPILITKELDEVAEKTSKLESNDTALTIKINKVTNEIKASYLIDEQRLE
LSFKMPANYPLTNVEAIGLSRVGISEQKWKQWILSAQRVITGMNGSVVDSLDLFSKNVNL
QFSGFEECAICYSILHVVDRKLPTKTCPTCNNKFHGACLYKWFRSSGNNTCPLCRSEIPF
RR
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggtggcgtgaatacatttcaacagtactctacagacttcggattcggtcat
aatggtgtgaaattatctttcaactactttgacgggtttcctgaaccctcacttttgaac
tctttagcatccaatgatttgaaactgatcttcaaatcgcttttgaaaagagatgaaaca
actaaagagaaagcactcaacgatctgctgaagctggtcgaaaattacactaaaaatgaa
gggctgtttgatagcgatatattttttctttgctggtctcaggtttacccaaaattgttg
gtcagcgaatccaagaccatcagagtgagctcgcatcttgtaacatcaaagcttgtgaaa
ctgcttaataagaaggtttcaaagtttttgagagatgtgatgccactgcttcttttaggc
acttgcgatacggattcttcagtgagcaaagcttgtaatgcctttttgaacgatatattt
gattgtaatactagcaaggttaactctctgtggtccgtctttcaggaggacattcttaaa
atcacagaggaactggtggtaaaagagaacgaagagacgatatctgatgagcgttttgtt
ggtaaagaagactctctccttaggttcaatcggttgattactagcgctatgcaactgctt
acgaacctcatcagctctgatagcttcgacagtgtaaaacatgaagaaatcacccatgat
gttttgatttccgaatgtttatggcagttattgagtctaacaaatacacactttttgaaa
agttacgaagctgctctcgtattgcagaaaactttgtacaagaataacctcttacaaagg
cacaaagacgtgttgaagttatcgacgaagaaattgctgaaatctctttctcatgttaac
gctaagaattctttgaaggtggcacatttggctggaccgattcttgacaatttgactatg
ttggatcattaccagaaagggaagatatggacctacgataaatctgcgagggacaggttt
ctacagtttgtggttgccgcatcgaaaaaccctgttccaggatttttcgacgctttgtac
aagttctacgaggaatcgtcaagtcacgaattgctcgatgagaagaaacagtggcttcca
ttatggcgagggtccaatgacactctcagggaaaagcagttccttgggagacacggtccg
gaactgctcggcgaattttgggctaattacagaaaatttatcagtcactgcagtgttcca
gatgtttctgaggtagcgaaagaagacgttctaaatattcttcgctccggcaagcaactt
tcaagattgccttccttgaaggcggccttgatcgattttctggatccagaaattgttgct
aatcaaataaaggctgccgttaatcaagatgataaagaggcaggtctactattgaacaat
ttaatgctgttgttatgctctgcggctaatggggaggcagcattgcatgatgttgccagc
gccatgcttgagctgatgtcaaaggatcaagatgactttggtccaaaaaagcagaaagtg
cttgaagtctacagttatttcgtgaactctggtatcatttctgttgctgatgaagtaact
cagtttgtttacgaagttccaacctggatcgacaagaacacctacaagagtctgtccatt
ttcataagtgattactcgaagtcagtaatagctcacaaagataaaaactttgcaactgtg
atggaagattttattacggcagcgtcatcggctgaaggtattgcggaatcgcgcatcgta
agaactttaaatctgttggataatggtgtctccccagcggtgctctcttcaacaatcgta
caggactttgttcagaactacatcaactcatatgcctacaatgactatggtgagctattt
aatggtcgtctgattgatgagcacaatgttgttcaactttatgagaaatcagttgaaggc
aaacaaacggaatttttcctccatcatctttccagcttgaattatcacgctttagaagcg
ctgttaactgagtctgactttttgtcaggtaatttatttgaaggatctcttgagcaggca
gagagtatctatcaattgataaagcctctccttaataatggcccaattgtaaagaacttg
gcgaatgccattatctcatatgccaagacaaaaccccgccttgtgggtaacgactttgtg
ttgagaatagcagaggaactcattaccttacaaagagatggtctggatatttttgtaccg
cccgacctagaattggtattttttgatgctgttccgttcattgattatagacttgccctc
gtcagctctttgaagcttaatactcatctgtttgaattgtcctcagatgaactaaacctg
tctaaagcagagcagctaatcaggtacggtcttttcttggatgctttaatcagtcgagtt
ccagcgggcctggacaacaagctctcagtttttctcacaatggtatgtgatcttgccgaa
gacttcaactgtctttcagaagatcctcaagaggagattactgaatttaagaacactctt
ttcaggggaaaattggaaggcttctctttcgaagatgtcactgatttggtatgccaggtc
aatccaaatgatgaacgtccgctcgacatactatcccatctcatcgctgattcatcttca
atcactgtgacctattaccacctccgcattttacagaaaattttgcaaaataagatagat
tccatcacttcagcatctttcatcagaaaattaccttccattgagaggttcgttatctcc
accatcagaagtaaagataagagccagcacaactatctgttgtgtgggatcattttatct
gcagcagagaaattcaccgatctcgagatatttggcaagttgagaaacgttttagcttct
gagtgcattggagtcaaagaaaatgagctacttgagaagtcctacaaaaacattatcctt
ctaagtaatttgttacaatctcagggttcgaccgaatcaccacctccaattccataccaa
agattaaacatgatgctcaattctttatcccaatggctagatagcgacttggcatatgaa
tcagggttcacccaggtacggttgtccctacttaagctgtgcgctcttttggctcggaca
ccctcaatcacggaagcttctaagggtttttatgagttcagtatggctttattgagcgat
tctttgtcgatgtgcctgttggatgatacctacttcttacttgagttacgcttgtactgt
ctggtactgcacgaagagcttaccaaaagtgtgtggaagcagcatctcaatacaggttcc
gatgagatgctcagtggattggttgaactgagcttgatcaattttgcgacagaaaagaac
aaccagatatcagcagtattctatcgtactcttttcagagtcctgagcggatatcaagtc
aaacaagttgtgaaattctatcctgatgttttatctgctttcctaagcaacgagggtttt
gctaatatcaacaggacaagaatgttattcgctgaactcaaaaggttggtgattgagagg
cagaaagatgcctttttagaacttgagtttgagaagcagaaaaagcagaaaaaggaaaca
gagcatcagagcgacgaaggtgccggggaagacttacctgtgaacgacaaatttgagctt
cctccaggtctgatcgaaaaaatgtgcgtcgaaattcctgaggattatttagaatgtgaa
gatgaatatggcttcctcaagtatttatggttctgggacctagccttctgttttttcaat
gacgcttcctatgatttgcgtcaaaagttcattgatcaattgagaagtaggaacttgata
acgatctttttcgattttgtctccgatcaaatcgatttgcaagacacgaggttttggtca
gaagcaggatccgctgccattcaagaatattcagttcagagcaacgacttctcaccatac
agagaggacctttatccggagtgtaagaagctactcggccactcaatgtataatatgttc
ctaaatgttgggtccttaacaagtaattggtggttgaacatcaaggaccgaacattgcaa
gcgaagatagagaaatttgtgactactttcatttcacctatccttattacgaaagagttg
gacgaggtggcagagaagacgagtaaattagaatcaaatgataccgcattaacaatcaag
ataaacaaagttacgaatgagatcaaggcgagttatctgattgatgagcaaaggctcgag
ctctcctttaaaatgcctgctaattatccactaaccaacgttgaggctattggtctgtcg
cgagtcggtattagcgagcaaaaatggaaacaatggatactgtccgctcagagagtgatc
accgggatgaatggctcggtagtggactctttggaccttttcagcaaaaatgtcaatcta
cagttttccggtttcgaggagtgtgctatctgttattccattttacatgtggtggatagg
aagcttccaacgaaaacatgtcctacatgtaataataagttccatggggcgtgtctttac
aagtggttcagatcgtctggtaacaacacatgcccactttgtcggagcgaaattccattc
agaagatga
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integrated database retrieval system