Torulaspora globosa: HG536_0H02800
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Entry
HG536_0H02800 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
tgb
Torulaspora globosa
Pathway
tgb03008
Ribosome biogenesis in eukaryotes
tgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HG536_0H02800
09123 Folding, sorting and degradation
03018 RNA degradation
HG536_0H02800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgb03021
]
HG536_0H02800
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0H02800
03009 Ribosome biogenesis [BR:
tgb03009
]
HG536_0H02800
03016 Transfer RNA biogenesis [BR:
tgb03016
]
HG536_0H02800
Transcription machinery [BR:
tgb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
HG536_0H02800
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
HG536_0H02800
Ribosome biogenesis [BR:
tgb03009
]
Eukaryotic type
Pre-60S particles
RNases
HG536_0H02800
Transfer RNA biogenesis [BR:
tgb03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
HG536_0H02800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
59328171
NCBI-ProteinID:
XP_037141579
LinkDB
All DBs
Position
8:487752..490907
Genome browser
AA seq
1051 aa
AA seq
DB search
MGVPSFFRWLSRKYPKIISPVLEEQPQVIDGVTLPIDYAAPNPNGELDNLYLDMNGIVHP
CSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRSRRFRS
ARDAQLENEAREQVMREREEIGEVIDESVKSKKTWDSNAITPGTPFMDKLAAALRYWTSF
KLSTDPGWRNLQVIISDATVPGEGEHKIMNFVRSQRADPQYNPNTTHCIYGLDADLIFLG
LATHEPHFKILREDVFAQNNRKRHNFKDTLDMTEEEKQLIAKEDSEKPFLWLHISVLREY
LAAELWVPKLSIPFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRENSIDILLDIWKVVLP
GLKSYMTCDGELNLKSVETLLGHLGAREADIFKTRHIQEVRKQESIQRRKLQRDVSKGQD
RHPTKVNEQLQMYDTQGNLATGSWNLTTSDMVNLKKEIMLANEGDAEAIAIVKAQSDKND
QIMKEISSTDMDKVVSEANKANYSVADLMKKKLIAKKHKLEQEEAKQEREAKRAKAEEEN
IDVKQAAAERELDEEIRAEIINEVEEEDADDDDEDNDADENEEPIESGQISFEDPKGGQS
VPVVSSGGMRSGVFDSDAEVRLYEPGYKERYYIAKFNIGEQEIEPLRKDLVKHYIEGVSW
VLAYYYQGCASWDWFYPYHYAPFAADFIGIADIKIEFEKGEPILPYEQLMSVLPAASGHT
LPPIFRPLMSDPDSEIIDFYPTEFPIDMNGKKMSWQGIALLPFIESKRLLRVVREQYRLL
SDYEKSRNVRKDPVLIISNKNVNYEKFAKRLFKETSEETDLKFQHFKSGLSGIVSTDVEG
FQLNSKMQCPIQTGSLPELSTNLFLKMAFKLQPLPGRNKSVTLNGFIPSEPVLSPYDLDA
IYYRYNNSQNGNRSGRWNFENDMRQNKVPVGPSGTTQYKPRVGGFRSFYYFGQMNNTANY
SNEYNGRNYQQAEQYAGQRRYPGADNYRGNSGGAKNQYNTHQSRYSDSYGTGAGRSYNVR
DRQYSGNGTAIGRRYQGSNRPAYKSGYTPRR
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttccttcgttcttcagatggctttcaaggaagtatcctaaaatcatatcgcct
gttttagaagaacaacctcaggttatagacggtgtaacgttacctatcgattatgcggct
cctaatcctaatggtgagctggacaatctgtatttggatatgaacggtattgtgcatccg
tgttcgcatccggagaacaagcctccgcctgagacggaagacgagatgcttcttgccgtg
tttgagtacactaatcgagtcctgaatatggctagaccacgtaaagtgctgatgatagct
gtggatggtgtagctccgcgtgccaagatgaaccagcaacgttctcgtagattcagaagc
gccagagatgctcaactggaaaatgaagcccgcgaacaagtcatgagggaacgtgaggag
attggagaagtaattgacgaatcagttaaaagtaaaaaaacctgggattccaacgctatc
acaccgggaactccgttcatggataagctggcggcggcgctacgttactggacttccttt
aagctatctacagatcccggttggcgaaatttgcaagtcataattagcgatgccacggtg
ccgggcgaaggtgaacacaagattatgaacttcgttagatcgcagcgggcggaccctcag
tataatccgaacaccactcactgtatatacggtttagacgccgatctgatctttttaggt
ttagcgacacacgagccgcatttcaagatactgagagaagatgtgttcgcccagaacaat
cgtaaaagacacaacttcaaggatactttggatatgactgaggaggagaagcagcttata
gccaaggaggactccgaaaagccatttttatggttgcacatcagtgtactgagagaatat
ctggctgctgagttgtgggtgccgaaattatcgatcccatttgacctggaacgagccatc
gacgactgggttttcatgtgttttttctgtggtaatgactttcttcctcatctgcctagt
cttgacgtcagggagaatagtatcgatatattattagacatatggaaggttgtcctgccg
ggcttgaagtcttatatgacatgtgatggtgagttgaacttgaagtctgttgaaacgcta
ttgggacatctgggtgcccgtgaagcggacatcttcaagacgagacacatccaggaggtg
agaaaacaggaatcaattcagaggaggaagttgcaaagagatgtttcgaagggtcaggat
agacatccaaccaaggttaatgagcaattacagatgtatgacacccaaggaaatcttgca
acgggctcatggaatctcactacaagcgatatggttaatctgaaaaaggagattatgtta
gcaaacgaaggagacgctgaagcgatagctattgtaaaagcgcaaagtgataagaacgat
caaattatgaaagaaataagctcaactgacatggataaagttgttagcgaggctaataaa
gccaattactccgttgctgatctaatgaagaagaagttgatagccaagaagcacaagctg
gagcaggaagaagcgaaacaagaacgtgaggccaaacgagctaaagccgaagaagaaaac
atagacgtaaagcaggcggcagcagaaagagaactggatgaagaaatcagagccgagatc
atcaatgaagtcgaagaggaagatgccgatgatgatgatgaggataatgatgctgatgag
aatgaagagcctatagaaagcggacagatctccttcgaagatccaaaggggggccagtct
gtgccagtcgtctcttcgggtggtatgcgcagtggagtctttgacagtgatgctgaggtg
aggctatatgaacctggttataaagagagatactatattgccaagttcaatatcggcgaa
caagaaattgagcctttgaggaaggatcttgtaaagcattacattgaaggtgtctcatgg
gttttagcctattattatcaaggctgtgcgtcatgggattggttttatccttatcattat
gcaccatttgctgccgactttattggtatagccgacatcaagatcgagttcgaaaagggt
gagccaatcttgccttacgagcaactgatgagtgtgctccctgcggcctctggtcacacg
ttacctcctatattcaggcctttgatgagtgatccagactcggagattatagacttctat
ccaacagagttcccgattgatatgaatggaaaaaaaatgtcgtggcaaggcatagcgctc
ttaccgttcattgagtctaagagactgctgagagttgtgagagagcagtatcgactttta
tccgattatgagaaatcgcgtaatgttcgtaaggatccggttctaatcatcagcaataaa
aacgtcaactatgagaagtttgcgaagcgcttatttaaagaaactagcgaggagacggat
ctaaagtttcagcatttcaagagtggccttagcggtatcgtttcaactgatgttgaagga
tttcagctgaatagcaaaatgcagtgccctattcagacgggctccctgcccgagctttct
acgaacctatttctcaagatggcattcaaattgcagccgctacctgggagaaataagtct
gtgacactgaatggttttataccatccgaaccagttttatcgccttatgatttggatgcc
atctattacagatacaataacagccaaaatggtaaccgatctggtcgttggaattttgaa
aatgatatgaggcaaaacaaagtacctgtgggccccagcggtaccacacaatataagcca
cgagttggaggatttcggtctttttactattttggacagatgaacaacacagccaactat
tccaatgagtacaatggtaggaattatcagcaagcggaacaatatgcaggtcaaagaaga
tatcccggtgctgacaactacagaggtaacagcggaggcgcaaagaaccagtacaatacc
catcagagccgttactccgatagctatggaactggtgccggtcgcagctataatgttcgc
gacagacagtattcgggcaatggtactgccattggaagaaggtatcagggatctaatagg
ccagcatacaaatctggatatacaccgcgccgataa
DBGET
integrated database retrieval system
