Torulaspora globosa: HG536_0H03490
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Entry
HG536_0H03490 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tgb
Torulaspora globosa
Pathway
tgb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HG536_0H03490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgb03041
]
HG536_0H03490
03009 Ribosome biogenesis [BR:
tgb03009
]
HG536_0H03490
Enzymes [BR:
tgb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HG536_0H03490
Spliceosome [BR:
tgb03041
]
Complex A
U2 snRNP components
U2 related factors
HG536_0H03490
Complex B
HG536_0H03490
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
HG536_0H03490
Ribosome biogenesis [BR:
tgb03009
]
Eukaryotic type
90S particles
Helicases
HG536_0H03490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
HA2_N
SRP54
AAA_19
Flavi_DEAD
ResIII
AAA_23
AAA_7
AAA_30
ABC_tran
Motif
Other DBs
NCBI-GeneID:
59328239
NCBI-ProteinID:
XP_037141647
LinkDB
All DBs
Position
8:626740..629058
Genome browser
AA seq
772 aa
AA seq
DB search
MGSKRRLSEKTEHFDPVTTSVPELAAEIAEERTKTHPIPPEEPLEHHDAGEFSGLTRHQT
TTEQAAKLEDAKINPFTGQEFTPRYFDILKIRRELPVHAQRAEFLKIYQNNQIMVFVGET
GSGKTTQIPQFVLFDEMPHLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRF
ENKTSNRTILKYMTDGMLLREAMEDHELKRYSCIILDEAHERTLATDILMGLLKQVVLKR
PDLKIIVMSATLDAEKFQRYFHNAPLLAVPGRTFPVEIYYTPEFQRDYLDSAIRTVLQIH
ATEESGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHLQQRIFE
PAPESHNGRPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISK
ASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLV
HFDFMDPPAPETMMRALEELNYLACLDDEGNLTALGRLASQFPLDPMLAVMLIGSFEFNC
SEEILTIVAMLSVPNVFMRPSKDKKRADDTKNYFAHSDGDHITLLNVYHAFKSDEAYEYG
IHKWCRDHFLNYRSLAAADNIRSQLERLMIRYNLELNTTDFESPKYFDNIRKALASGFFM
QVAKKRSGGKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTTKNYIRTVTSVRPEWL
IEIAPAYYDLENFQKGDVKLSLERIHERVHTMKQLKTEKHKKKSKKDKHNGK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgggatctaaaagaagactgtcagaaaaaacggagcactttgatccggtgacgacgtcc
gttcctgagcttgcagccgaaatagcagaggagagaactaaaactcatcccatcccacca
gaggaaccacttgagcatcatgatgctggggaatttagtggtttaactcgccatcaaacg
actacagagcaggctgcgaagttggaggatgccaagatcaatccttttactggccaagag
tttacaccaaggtattttgacatactgaagattagacgtgaactaccagttcacgctcaa
cgtgcagaatttttgaagatttatcagaacaaccagatcatggtctttgttggtgagacc
ggttccggtaagacaacacagattcctcaatttgtgctgttcgatgaaatgcctcaccta
cagaatacccaggtagcctgtactcaaccacgtcgtgtggccgcgatgtcggttgcacaa
agagttgctgaggaaatggatgttaaactgggcgaggaagtcggttactccattagattt
gaaaacaagacttccaacagaactattttgaagtacatgactgatggtatgcttctaaga
gaagctatggaggatcatgaattgaaacgctactcctgtatcattttagatgaagcacac
gaacgtactttggctacagatattctgatgggcttattgaagcaagtggttttgaagaga
cccgatttgaaaattattgtcatgtcagccactttggatgcagagaagtttcagcggtat
tttcataacgctcctctgctagcagttcctggcagaactttcccagtggagatttattac
actcccgagttccaaagagattacttggattctgctattcgcactgttttgcaaatacac
gccacggaagaatctggtgatattcttttgtttctgacaggtgaagacgagatcgaagat
gctgtaagaaagatatccctcgaaggtgaccaattggtgagggaagaaggctgcggtcct
ctatctgtctatccactttatggttctttaccacctcatttacagcagcgtatcttcgag
cctgcccctgagtcgcataatggaaggcctggtagaaaggtcgtggtgtccaccaatatc
gcagagacatctttgaccatcgatggtatagtttatgttgtcgatccggggttttctaaa
cagaaagtctacaatcctcgtatcagggtcgaatcattgcttgtgtcacctatttctaag
gcatctgctcaacagagagctggtcgtgccggtcgtaccagacccggtaaatgtttcaga
ttatacacagaagaagctttcaagaaagaattgattgagcaaagttaccccgagattctg
cgctcaaatctgtcatccactgtcctagaattgaagaagctgggtatcgatgatcttgtg
cacttcgattttatggatcctccggctccagagaccatgatgagggctctcgaagaactg
aactacttggcgtgcttagatgacgagggtaatttaacagcattgggtagactggcctcc
cagttcccacttgacccaatgttggctgtcatgctgattggctcatttgaattcaactgt
tctgaagaaattttgaccattgttgccatgctttccgtgcccaacgtgttcatgcgtcca
tcgaaggacaagaaaagagctgatgataccaagaactattttgcacactccgacggtgac
cacataactctgctgaacgtttaccatgctttcaagtcggacgaagcctacgaatacggt
atacacaagtggtgccgggatcacttcttgaattatagatcgcttgctgcagcagacaac
attcgttctcagctggagaggctaatgattcggtataacctagaactaaacacgaccgac
ttcgaaagtccaaagtactttgacaacattagaaaagccctagcctccgggtttttcatg
caggtggccaagaagcgttcaggcggcaaaggatacattactgttaaggacaatcaggat
gtcttgatacatccaagcacagttctgggccacgatgcggaatgggttatctacaatgag
tttgttctaacgacaaaaaactacatacgcacggttacatcggtgaggcccgagtggcta
atagaaattgcgccagcctattacgacctagaaaatttccagaaaggtgatgttaagttg
tcgcttgagaggatccatgaaagagtgcacaccatgaagcagctaaaaactgaaaaacac
aagaagaagagcaagaaggacaagcataatggaaaataa
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