Terrisporobacter glycolicus: L0P85_12400
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Entry
L0P85_12400 CDS
T08249
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tgc
Terrisporobacter glycolicus
Pathway
tgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0P85_12400 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgc03019
]
L0P85_12400 (rny)
Messenger RNA biogenesis [BR:
tgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L0P85_12400 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
RMC1_N
MctB
Motif
Other DBs
NCBI-ProteinID:
UPA32415
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All DBs
Position
complement(2489608..2491146)
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AA seq
512 aa
AA seq
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MDVIAIIASILGLAIGIIVGYFVRKNISETKIGEAKDLAKDIIDKANKDSETIKKEKLLE
AKEEIHKWRTDAEKEQRERRNEVQKYERRVFQKEESIEKKQQNLEVKESSLNEKLKAVQR
KEEEVEAIKVKQLEKLEDISGVTCEKAKDIILANAEREVRHEMSIMIKDIETQAKEEAEK
KSREIIGYAIQKCAADHVAETTVTVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLIIDD
TPEAVILSGFDPIRREVARIALEKLISDGRIHPARIEEMVEKARKEVDNIIKEFGEQATF
ETGVHGLHPELVKLLGRLNYRTSYGQNVLKHSIEVAHIAGIMAAEIGADIKLAKRAGLLH
DIGKAVDHEMEGTHVEIGMDLLRRYKESKEIIHAMSTHHGDYEPQIVEAVLVTAADAISA
ARPGARRETLEAYIKRLEKLEEIANSYEGVEKSYAIQAGREIRIMVKPDSVNDEGLHLLA
RKMTKEIEDELEYPGQIKVSIIRETRAIEYAK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtcatagcaataatagcaagcatacttggtttagctattggtattatagttgga
tattttgttagaaaaaatatatctgaaactaaaattggtgaagctaaagacttagccaaa
gatataatagataaagcaaataaagactcagaaacaataaaaaaagaaaaattattagaa
gcaaaagaagagattcacaaatggagaactgatgcagaaaaagaacaaagagaaagacgt
aatgaagttcaaaagtatgaaagaagagtttttcaaaaagaagaatctattgaaaaaaag
caacaaaatctagaggttaaagaatctagtttaaatgaaaagttaaaagcggtacaaaga
aaagaagaagaagtagaggcaataaaagttaagcaacttgaaaagcttgaagatatatct
ggtgttacttgtgaaaaagctaaagatataattcttgcaaatgctgagagagaagtaaga
catgagatgtctataatgattaaggacattgaaacgcaagctaaagaagaagctgaaaag
aaatctagggaaataataggctatgctatacaaaaatgtgcagcagatcatgttgctgaa
acaacagttactgttgttaatttacctaatgatgaaatgaaggggagaataataggtaga
gagggaagaaatataagaactctagaaactttaacaggtatagatcttataattgatgac
actccagaagctgtaattttatcaggtttcgatcctattagaagagaagtagcaagaata
gcattagaaaaactaatatcagatggaagaatacatccagctagaatagaagaaatggta
gaaaaggcaagaaaagaagttgacaatatcatcaaagagtttggagaacaagctactttt
gaaactggtgtacatggattacatcctgaactagttaaattacttggtagattgaattat
agaacaagttatggacaaaatgtattaaaacattcaatagaagttgctcatatagcagga
attatggcagcagaaattggagcagatataaaactagcaaagagagctggtttacttcat
gatataggtaaagcagtagaccacgaaatggaaggaactcatgttgaaataggtatggat
ttacttagaagatataaagaatctaaagaaattatacatgcaatgagtactcaccatgga
gattatgagccacaaatagttgaggctgtgttagttacagcagcagatgccatatctgca
gcaagaccaggtgcaagaagagaaactttagaagcatatattaagagattagaaaaactt
gaagaaatagctaactcttatgaaggtgtagaaaaatcttatgcaattcaagctggtaga
gagattagaataatggttaaacctgatagtgtaaatgatgaaggacttcatttattagct
agaaagatgactaaagaaattgaggacgagcttgaatatccaggtcaaataaaagtaagt
ataataagagaaacaagagcaatagaatatgctaaataa
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