Terrisporobacter glycolicus: L0P85_12520
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Entry
L0P85_12520 CDS
T08249
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
tgc
Terrisporobacter glycolicus
Pathway
tgc03030
DNA replication
tgc03430
Mismatch repair
tgc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L0P85_12520
03430 Mismatch repair
L0P85_12520
03440 Homologous recombination
L0P85_12520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgc03032
]
L0P85_12520
03400 DNA repair and recombination proteins [BR:
tgc03400
]
L0P85_12520
Enzymes [BR:
tgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L0P85_12520
DNA replication proteins [BR:
tgc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L0P85_12520
DNA repair and recombination proteins [BR:
tgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L0P85_12520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
DNA_pol3_a_NI
tRNA_anti-codon
Rv2179c-like
RNase_H_2
DEDDh_C
HHH_3
FKBP_C
Motif
Other DBs
NCBI-ProteinID:
UPA29421
LinkDB
All DBs
Position
complement(2514441..2518736)
Genome browser
AA seq
1431 aa
AA seq
DB search
MDNIKDYLEKLEIKNSRLEKQLKEVQVSKVVYFKEEKIFYMYLVSKDIISHEILDELREE
LLGKLKYFKNIRLKIKFNGFGRKSDKDIVKNYWHNILYILKKICPAIEGWKKQVEYMCLD
NMLKIKIPKDIFYEKLKKNNIEDVIRNVLLEELGIDYQVKVEKAVSDKTDIKKLIEKTDK
EIEDLIKEMEFEVVDEDNEEESYVIKDEYDEHLIYGEDVNSLVHPIKDLNQKSKTVAIIG
EIFNIENKELRNGKILSIMSITDNTSSINCKLFLNDLNKDKVLDSVKEGSYVKIKGDVLY
DTYQREITMTISGIRQEEKPKRKDICEKGKRVELHAHTQMSSMDALSPAKKLVKQAADWG
HKAIAITDHGVVQAFPEAMDAGKANNIKILYGVEGYLVEDNLPVIQKANDKDLSQTFIVF
DLETTGFSNKNDKITEIGAVKVENFKIVDRFSQLINPEKDISYKVQELTGITNDLIKDKP
TIEEILPKFIEFIGDSVLVAHNADFDMGFMQQKCREQNIEFKNTSVDTLTLARTLLPHMK
RFRLNLIAKELGIPLLNHHRAVDDAEATAHIFIKFLEMIKKKGAEKLSDVNMILGDIDYT
KLRTNHVTLIAKNQIGVKNLYKIVSDAHVNHFYRAPRILKSVLEEYKEGIIIGSACEAGE
VFQAVKQNKSDEDLERIISLYDYIEVMPIDNNRFMIDKGEVKDEEELRDLNRRMIEVAKN
FGKIPVATGDVHFIDKHEAIYRKVLKYSQGFKIDEEETYLHFRTTDEMLDEFKYLGEDLA
YEVVVENTNKVADMIEDILPIPNATFPPVIEGSDKELREMCNAKAERIYGCPLPDVVRKR
LDRELNSIISNGYAVMYIIAQKLVTKSLADGYLVGSRGSVGSSLAATMSDITEVNPLPAH
YICENSQCKYSYFYEIGEWGSGVDLPAKDCPKCGRPLKKDGHDIPFEVFLGFEGDKEPDI
DLNFSGSYQPVIHKYTEELFGEGHVYRAGTIGTVAEKTAFGYAKKFVEENDLNSTSAEVL
RLANGCTGVKRTSGQHPGGVMVIPDYKDVYDITPIQYPANDTSCGVITTHFDYHSISGRI
LKLDILGHDVPTIIRMIEDITGKIATEIPLDDKETMSLFTSTDALGVTPEEINCPIGCLA
IPEFGTKFVRQMLLDTKPTTFAELVRISGLSHGTDVWLNNAQDLVVEGTVEFKEVISTRD
DIMNYLIFKGLPPKMAFTIMESVRKGKGLKPEFIEEMKKNDVPDWYIGSCQKIKYMFPKA
HAVAYVMMSFRLAYYKVHYPEAFYATYFTTKAEDFDADLIVKGLDSIRNKMDEIISLGND
ATAKEKNMLTVLEVAYEMYARNIKILPVDIYKSDATEFKVMGENQILPPMIALQGVGENA
AIHIQQERENGEFISKEDLRKRTKISKTVIETLTNHGSLDNMSDKNQLSLF
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggataatattaaagactatttagaaaaactagaaattaaaaatagtagattagaaaag
caattaaaagaagtacaagtatccaaagtggtatacttcaaggaagaaaaaattttttat
atgtatttagtgtcaaaggatattatatcacatgagattttagatgaacttagagaagag
ctattaggcaaattgaaatattttaaaaatattaggctcaaaattaagttcaatggtttt
ggcagaaaatcggataaagatatagtgaaaaactattggcataatattttatatatatta
aaaaaaatctgtccagctattgaaggatggaaaaaacaagtagagtacatgtgtttagat
aatatgctaaagataaagattcctaaagatattttttatgaaaaactaaaaaagaataat
atagaagatgttataagaaatgtattattagaagaattgggaattgactatcaggttaaa
gttgaaaaagcagttagtgataagacggatataaaaaagttaatagaaaaaacagataaa
gaaattgaagatttaataaaagaaatggaatttgaagtagtagatgaagataatgaagaa
gaaagttatgtaattaaggatgaatatgatgaacatttaatttatggtgaagatgttaat
agtttagtacatccaataaaagatcttaatcaaaaatctaagacagtagcaatcataggt
gaaatatttaatatagaaaataaagaattgagaaatggtaaaatactttcaattatgtct
atcacagacaatacaagctctattaattgtaagttgtttttaaatgacttgaacaaggat
aaggtgttagatagtgtaaaagaaggatcttatgtaaaaattaaaggtgacgtattatat
gacacttatcaaagagaaatcactatgactataagtggtatcagacaagaagaaaaacca
aaaagaaaagatatttgtgaaaaaggcaaaagagttgagttgcatgctcatactcaaatg
tcttcgatggatgctttatctcctgcaaaaaaactagttaaacaagcagctgattggggg
cataaggcaatcgccataacagatcacggtgttgttcaagctttcccagaagccatggat
gcagggaaagctaacaatataaaaatactctatggagtagaaggttatttagtagaagat
aatttacctgtaatacaaaaggcaaatgataaagacttatctcaaacattcatagtattt
gacttagaaactacaggtttttcaaataaaaatgataaaattacagaaataggtgcagta
aaagtagaaaactttaaaattgtagatagatttagccaattgataaatcctgagaaggat
atttcttataaagtccaagaacttactggtattacaaatgacttaataaaagataaacct
actattgaagaaatattaccaaagtttattgaatttataggagatagtgtgttagttgct
cacaatgcagacttcgatatggggtttatgcaacaaaaatgtagagaacaaaatatcgaa
tttaaaaatacatcagttgatacattaacattagcaagaaccctacttcctcatatgaaa
agatttagattaaaccttatagctaaggaattaggaattccattgcttaatcatcataga
gctgtagatgatgcagaagctactgcacatatatttattaaatttttagaaatgataaaa
aagaagggtgcagaaaaattaagcgatgtaaatatgattttaggagatatagattatact
aaattaaggacaaatcatgtaacattaattgctaaaaatcaaattggggtaaaaaattta
tataaaatagtatctgatgctcatgtaaatcacttttatagagcgcctagaatattaaaa
agtgttttagaggaatataaagaaggaataataattggctcagcttgtgaagctggggag
gtttttcaagctgtaaaacaaaataaaagcgatgaagacttagagcgaataatatctctt
tatgattatattgaagttatgccaattgataataatagatttatgattgataaaggtgaa
gtcaaagatgaagaagaattaagagatctaaatagaagaatgattgaagtggcaaagaac
tttggaaaaattcctgtagctacaggagatgtacactttatagataaacatgaagctatt
tatagaaaagtgcttaaatactcacaaggttttaagatagatgaagaggaaacttatctt
cattttagaacaacagacgaaatgctagatgaattcaaatatctaggagaagatttagca
tatgaggttgtagtagaaaatacaaataaggtagcagatatgatagaagatatacttcca
atacctaatgcaacttttccaccagtaattgaaggttccgataaagaacttagagagatg
tgtaatgctaaggcagagaggatttatggatgccctctcccagacgttgtgagaaaaaga
cttgatagagagttaaattcgattataagtaatggttatgcagttatgtatattatagct
caaaaactagttacaaaatctcttgcagatggatacctagttggttctaggggatctgta
gggtcttctcttgcggctacaatgagtgatataactgaagttaatccactgccagcacat
tatatttgtgaaaattcgcagtgtaagtattcttatttctatgaaataggagaatggggt
tctggagtggatttaccggcaaaggattgtcctaaatgtggaagaccattaaaaaaagat
ggacatgatataccttttgaggtttttcttggatttgaaggagataaggagccagatatt
gaccttaacttctcaggaagttatcaacctgtaattcataaatatacagaagaacttttc
ggagaaggtcatgtatatagagcaggaacaataggtactgttgcagaaaaaactgctttt
ggttatgctaagaaattcgtagaagaaaatgatttaaattcaacatcagcagaagtttta
agacttgcaaatggatgtacaggagtaaaaagaacttcaggacaacaccccggtggagtt
atggttataccagactacaaagatgtttatgatataacacctatacaatatccagccaac
gacactagctgtggagttataactacacactttgactatcactctataagtggtaggata
ctaaagcttgatatattaggacacgacgttcccactatcatcagaatgatagaagatatt
acaggtaagattgccacagaaatacctctagatgataaagaaacaatgtcattatttaca
tctacagatgctttaggtgtaacaccggaggagattaactgtccaataggttgtcttgct
atacctgaatttggaacaaaattcgttagacaaatgcttcttgatacaaagccaacaaca
tttgcagagcttgtacgtatatcaggattatctcatggtactgatgtttggttaaataat
gcacaagacttggttgtggaaggtacagttgaatttaaagaagttatatcaacacgtgat
gatataatgaactacttaatatttaaagggcttccaccaaagatggcatttaccataatg
gaaagtgttagaaaaggtaaaggattgaaacctgaatttattgaagaaatgaaaaaaaat
gatgtgccagattggtatataggttcatgtcaaaagataaaatacatgttccctaaagct
catgctgttgcttatgtaatgatgagttttaggctagcttattataaagtgcattatcca
gaagcattttatgccacatattttacaaccaaagcagaagattttgatgctgacttaatt
gtaaaaggactagattccataagaaacaaaatggatgaaattatttctctaggtaatgat
gcaacggctaaagaaaaaaatatgctgacagttcttgaagttgcttatgaaatgtatgca
aggaatataaaaattcttccagtagatatttacaaatcagatgcaactgagtttaaagtt
atgggagaaaatcaaattctacctcctatgatagctttgcaaggggtaggagaaaatgca
gctatacacatacagcaagaaagagaaaatggtgagtttatatccaaagaagatttaaga
aagagaactaaaatttcaaaaactgttattgaaactctaactaatcatggatcgttagac
aatatgagtgataaaaatcaactttcattattttaa
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