Terrisporobacter glycolicus: L0P85_12585
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Entry
L0P85_12585 CDS
T08249
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tgc
Terrisporobacter glycolicus
Pathway
tgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0P85_12585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgc03019
]
L0P85_12585
Messenger RNA biogenesis [BR:
tgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L0P85_12585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF7600
eIF-1a
Motif
Other DBs
NCBI-ProteinID:
UPA32417
LinkDB
All DBs
Position
complement(2526308..2527984)
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AA seq
558 aa
AA seq
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MQLFKKNTNKVKVMALGGLNEIGKNMTVIEYKDEIVVIDAGLSFPEDEMLGVDIVIPDIT
YLLKNKDKVKGIFITHGHEDHIGALPYILKKIDVPVYGTRLSIGLIEVKLKEHKLNNVKL
NVVTPKQIIKLKNISVEFIKNNHSIPGSCSLAVHTDQGVIFHTGDFKIDLTPIDGDVMDI
HRICELGSAGVLLMLADSTNVEKPGFTMSERTVGAGLDDLFRKANGSRIIVSTFASNIHR
LQQIINTAVKFNRKVAVSGRSMVNVIGVAKELGYLEMEDDTLVDLNDLSKYDDNELVIIT
TGTQGEPMSALARMSSSEHKKVEIKKGDLVIISAHPIPGNEKLISKVINLLFERGARVVY
NDIADIHVSGHAAQEDLKLINRMVKPKFFMPVHGEYRMLKRHAELANELGMPDQNVFVMQ
TGQVLELDRNSAKVTATVPTGNVLVDGLGVGDVGNIVLRDRKHLSEDGLMIVVVTISKED
GKVLAGPDIISRGFVYVRESEDLMDGAKKVIKDVLTECEEKNIKEWAYLKNNIKENLKEY
LYIKTKRNPMILPIIMEV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgtttaagaaaaacaccaacaaagttaaagtaatggctttaggtggtcttaac
gagataggcaaaaacatgaccgtaatagagtataaggatgagattgttgtaatagatgcg
gggttaagttttccagaagatgaaatgttaggtgttgatatagttatacctgatataact
tatttactaaaaaataaggataaggtaaaaggtatatttataacacatggacatgaagat
catattggagctcttccatatatacttaaaaaaatcgatgtacctgtgtacggaactaga
cttagtattggactaatcgaggttaaattaaaagaacataaacttaataatgtaaaatta
aatgttgttactcctaaacaaataattaagcttaaaaatattagtgtagaatttataaaa
aataaccatagtataccagggtcttgttcgctggctgtacacacagaccaaggggttatt
ttccatacaggagactttaagattgatcttacaccgatagatggagatgttatggatatt
cacagaatatgtgagcttggaagtgcgggagttcttttaatgttagcagatagtacaaac
gtggaaaaaccagggtttactatgtctgaaagaacagtaggagcaggtcttgatgattta
tttagaaaggccaatggtagtagaattatagtatctacttttgcgtcaaatattcataga
ttacaacaaataataaatacggctgttaaatttaatagaaaagttgctgtctcaggaaga
tcaatggttaatgtaataggtgttgctaaggaacttggctatttagaaatggaagacgat
acattagttgacttaaatgacctatctaaatatgatgacaatgaattagtaattataact
acaggaactcagggagagccaatgtcggctcttgctagaatgtcaagtagcgaacacaag
aaagtagaaatcaaaaaaggagatttagtaataatttcagctcatccaataccaggaaat
gaaaagctaatctcaaaagtgataaatcttttatttgaaagaggagcgagagttgtttac
aacgatatagctgatatacacgtatcaggtcatgctgctcaagaagatttaaaacttata
aacagaatggttaagccaaaattctttatgccagttcatggagaatatagaatgttaaaa
cgtcatgcagaattagctaatgagcttggtatgccagaccaaaatgtatttgttatgcaa
actggccaagttttagaattagatagaaattctgcaaaagttactgctacagtaccaaca
ggaaatgtacttgtggatggacttggagtaggagatgtaggaaacatagttctaagagat
agaaaacatttatctgaagatggacttatgatagtagttgttactatatctaaagaagat
ggtaaagtgcttgctgggccagacattatatctagaggatttgtttatgttagggaatca
gaggatttaatggatggagctaagaaagtaataaaagatgttttaactgaatgtgaagaa
aagaatataaaagaatgggcatatttaaaaaataatattaaagaaaacttgaaggaatat
ttatatataaaaactaagagaaacccaatgatattaccaataatcatggaagtataa
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