Terrisporobacter glycolicus: L0P85_17655
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Entry
L0P85_17655 CDS
T08249
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tgc
Terrisporobacter glycolicus
Pathway
tgc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L0P85_17655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgc03400
]
L0P85_17655
Enzymes [BR:
tgc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L0P85_17655
DNA repair and recombination proteins [BR:
tgc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L0P85_17655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
PIF1
Helicase_RecD
DNA_pol_lambd_f
HHH
SLFN-g3_helicase
HHH_2
nSTAND3
T2SSE
AAA_22
UvrD-helicase
Thymidylate_kin
DEAD
TrwB_AAD_bind
ATPase_2
NPHP3_N
cobW
SRP54
PhoH
AAA
HHH_3
RsgA_GTPase
AAA_16
Ribosomal_S13
AAA_29
TraI_hel_assoc_N
AAA_12
AAA_24
ABC_tran
NTPase_1
MeaB
AAA_7
AAA_28
ATP-synt_ab
HerA_C
FtsK_SpoIIIE
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UPA30362
LinkDB
All DBs
Position
complement(3616465..3618687)
Genome browser
AA seq
740 aa
AA seq
DB search
MEKLQGMVSDIVFKNEENGYTIASLANENDEITIVGCMPTLSVGESIEIEGKWVNHKIYG
SQFEVQSFIPVTPSSLEGIYVYLSSGMIHGIGEKMAKRIVDKFGVDTLDIIQNTPERLTE
VEGIGMKKVKQIQESYEENRELRNIIIQLSPYGITPNYCLRIYKKYKDKSLEVINKNPYR
LAEEVRGIGFRIADDIASKIGIDKYSPDRIMQGILFTLNQSLGSGHTYLPKRILIEQSVK
ILGVEPKYVENGIMDLAYDQKIHLENMNGEILIYLMMYYICENGVCKEIVKLSQHETKDL
HINIEEEIEVVEKEDEISLANNQILAVKESINNGVTIITGGPGTGKTTTINTIIKIFENN
DQKVVLCAPTGRAAKRMSETSNKEAKTIHRLLEMGFATDSDELVFFKDEEDPIDADVIIL
DEASMVDIILMYNLLKAIKLGTRLLLVGDSDQLPSVGAGNVLKDIIDSNVIKTVRLNEIF
RQARESMIVVNAHKINNGEPLFLNVKNKDFFFLRKNNNEEILNEIIGLVSERLPKFYKFD
KLKDIQVLTSMRKGDLGVNNLNIELQKYLNPPNKYKQEEQFAKRTFRVGDKVMQIRNNYT
KKWETEDKSDRGEGIYNGDIGYIFHIDKDKKTVFVVFDKIKIASYKYDELDEIDHSFCTT
IHKSQGSEFPVVVIPIVWAPPMLLSRNLLYTAVTRAKKLVVLVGDVKYLEQMIKNNRIND
RYSNLSYKLNKFIKEGLLSK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattacaaggaatggttagtgatatagtctttaaaaatgaagaaaatggttat
accatagcctctttagccaatgaaaatgatgaaataactattgtaggatgtatgccaact
ttgtctgtaggagaaagcatagaaatagaaggaaaatgggtaaaccataaaatttatgga
tctcaatttgaagtacaaagttttatacccgttacaccatcttctcttgagggtatctat
gtttatttatcttcgggtatgatacatggaataggcgaaaaaatggctaaaagaatagtt
gataaatttggtgttgatactttagatattattcaaaatactccagaaagattaactgaa
gtagaaggaataggtatgaagaaagtaaaacaaatccaagaaagctatgaagaaaataga
gaacttagaaatataataatacaactatctccttatggaataactcctaattattgttta
agaatatataaaaaatataaagataaatccttggaagtgataaataaaaatccatataga
ttagcagaagaagtaagaggtataggatttagaattgccgatgatattgccagcaaaata
ggtatagacaaatattctccagatagaattatgcagggtattttatttactttaaaccaa
agcttgggaagtggtcatacatatttacctaaaagaatattgattgagcaatcagtcaaa
attttaggtgtagaacctaaatatgtggaaaatggaattatggatttggcatacgatcaa
aaaatacatttagaaaatatgaacggagaaatacttatctatttaatgatgtactatata
tgtgaaaatggtgtatgcaaagaaatagtaaagctatctcaacatgaaacgaaggatttg
catattaatatagaagaagaaatagaagttgttgaaaaagaagatgaaataagtttggcg
aacaatcaaatcttagcagtaaaagaatctataaataatggagtaacaattattacaggt
ggtcctggtacaggaaaaactacaacgataaatactataataaaaatatttgaaaacaat
gaccaaaaagtagtgctatgtgctccaacaggtagggcggctaagagaatgagtgaaact
tcaaataaagaagctaaaactattcatagattgctagaaatgggatttgctacagacagt
gatgaactagtattttttaaagatgaagaagatccaatagatgctgatgtgataatattg
gatgaagcatctatggttgatattatattaatgtacaatcttttaaaagctataaaatta
ggaacaagattacttttagtaggagacagtgatcaattaccttcagtaggagcaggaaat
gttctaaaagatattattgattccaatgtaataaaaactgtacgattaaatgaaatattt
agacaagccagagaaagtatgatagtagttaatgctcataaaataaacaatggagagcca
ttatttttaaatgtaaaaaacaaagatttcttctttttaagaaaaaataataatgaagaa
attctaaatgagataatagggcttgtaagtgaaagacttcctaagttttataaatttgat
aaattaaaagacatacaagtattaacttcaatgagaaaaggcgatttgggagtaaataac
ttaaatatagaattacagaaatatctaaatccacctaataagtataaacaagaagagcag
tttgccaaaaggacttttagagtgggagataaagttatgcaaattagaaataactacaca
aaaaaatgggaaacagaggacaaaagtgatagaggtgaaggtatatataatggagatatt
ggatatatatttcatatagataaagataagaagactgtttttgtggtttttgataagata
aaaatcgcttcttataaatatgatgaactagacgaaattgatcacagtttttgtacaaca
attcataagagtcaaggaagtgaatttccagtagtagttatacccatagtttgggcaccg
cctatgttgttaagtcgtaatttactttatacagcagttactagagcaaaaaagcttgtg
gtattagttggtgatgttaaatacttagaacagatgattaaaaacaatagaataaatgac
agatactctaatttatcatataaattaaataaatttataaaagaagggttgctaagtaaa
taa
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